RNA–Protein interactions for RNA: ENST00000160373.7

CTTNBP2-201, Transcript of cortactin binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTTNBP2, Length 5,970 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-201ENST00000160373 USP21Q9UK80 565 aa13.65□□□□□ -0.22
CTTNBP2-201ENST00000160373 KSR2Q6VAB6 950 aa13.65□□□□□ -0.22
CTTNBP2-201ENST00000160373 CCDC181Q5TID7 509 aa13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 SYCE3A1L190 88 aa13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 A1BGP04217 495 aa13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 MRE11P49959 708 aa13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 TTF1Q15361 905 aaPredicted RBP13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 SLAIN2Q9P270 581 aa13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 CKAP2LQ8IYA6 745 aa13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 LETM1O95202 739 aaPredicted RBP13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 CFAP100Q494V2 611 aa13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 APBA3O96018 575 aa13.64□□□□□ -0.23
CTTNBP2-201ENST00000160373 LGR6Q9HBX8 967 aa13.63□□□□□ -0.23
CTTNBP2-201ENST00000160373 HDAC9Q9UKV0 1011 aa13.63□□□□□ -0.23
CTTNBP2-201ENST00000160373 IARSP41252 1262 aaKnown RBP13.63□□□□□ -0.23
CTTNBP2-201ENST00000160373 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
CTTNBP2-201ENST00000160373 KLHDC4Q8TBB5 520 aa13.63□□□□□ -0.23
CTTNBP2-201ENST00000160373 DACH1Q9UI36 760 aa13.63□□□□□ -0.23
CTTNBP2-201ENST00000160373 NEFHP12036 1026 aa13.63□□□□□ -0.23
CTTNBP2-201ENST00000160373 PPP4R3AQ6IN85 833 aa13.63□□□□□ -0.23
CTTNBP2-201ENST00000160373 BRF1Q92994 677 aa13.63□□□□□ -0.23
CTTNBP2-201ENST00000160373 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
CTTNBP2-201ENST00000160373 ORC3Q9UBD5 711 aaPredicted RBP13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 SP4Q02446 784 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 ZNF771Q7L3S4 317 aaPredicted RBP13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 METAP2P50579 478 aaKnown RBP eCLIP13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 MMRN2Q9H8L6 949 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 FLT4P35916 1363 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 NEBLO76041 1014 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 DCAF5Q96JK2 942 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 STK32BQ9NY57 414 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 BRPF3Q9ULD4 1205 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 CEP131Q9UPN4 1083 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 TNNT1P13805 278 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 CPLX3Q8WVH0 158 aa13.62□□□□□ -0.23
CTTNBP2-201ENST00000160373 PPM1FP49593 454 aaPredicted RBP13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 NEK1Q96PY6 1258 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 KLF18A0A0U1RQI7 1052 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 CNBD1Q8NA66 436 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 UQCRFS1P1P0C7P4 283 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 TCERG1LQ5VWI1 586 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 MCM9Q9NXL9 1143 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 SAP30BPQ9UHR5 308 aaKnown RBP13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 RXRAP19793 462 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 IP6K1Q92551 441 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 CENPHQ9H3R5 247 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 LIMCH1Q9UPQ0 1083 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 A0A1W2PP64 1363 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 NSD2O96028 1365 aa13.61□□□□□ -0.23
CTTNBP2-201ENST00000160373 USP8P40818 1118 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 G2E3Q7L622 706 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 MAGEB6Q8N7X4 407 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 PCDHB15Q9Y5E8 787 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 ANKRD62A6NC57 917 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 SSFA2P28290 1259 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 TFCP2Q12800 502 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 HEATR3Q7Z4Q2 680 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 ZNF804AQ7Z570 1209 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 NCOA7Q8NI08 942 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 ZNF594Q96JF6 807 aaPredicted RBP13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 TBX22Q9Y458 520 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 TMEM266Q2M3C6 531 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 HSP90B2PQ58FF3 399 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 NPATQ14207 1427 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 UHRF1BP1Q6BDS2 1440 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 GJB2P29033 226 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 TMX1Q9H3N1 280 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 TIMM10P62072 90 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 WTAPQ15007 396 aa13.6□□□□□ -0.23
CTTNBP2-201ENST00000160373 ZYXQ15942 572 aaKnown RBP13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 DUOX2Q9NRD8 1548 aa13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 SDSP20132 328 aa13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 EIF6P56537 245 aaKnown RBP13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 NYXQ9GZU5 481 aa13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 MACROD2A1Z1Q3 448 aa13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 RDXP35241 583 aaKnown RBP13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 IFIT1BQ5T764 474 aaKnown RBP13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 ZKSCAN3Q9BRR0 538 aa13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 PCDH11XQ9BZA7 1347 aa13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 PCDH11YQ9BZA8 1340 aa13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 TAF5LO75529 589 aa13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 HSP90AA4PQ58FG1 418 aa13.59□□□□□ -0.23
CTTNBP2-201ENST00000160373 UFL1O94874 794 aa13.58□□□□□ -0.23
CTTNBP2-201ENST00000160373 LTKP29376 864 aa13.58□□□□□ -0.23
CTTNBP2-201ENST00000160373 KIF5BP33176 963 aa13.58□□□□□ -0.23
CTTNBP2-201ENST00000160373 DHX37Q8IY37 1157 aaKnown RBP13.58□□□□□ -0.23
CTTNBP2-201ENST00000160373 BICC1Q9H694 974 aaKnown RBP13.58□□□□□ -0.23
CTTNBP2-201ENST00000160373 HMGB1P09429 215 aaKnown RBP13.58□□□□□ -0.24
CTTNBP2-201ENST00000160373 MAP3K11Q16584 847 aa13.58□□□□□ -0.24
CTTNBP2-201ENST00000160373 DNAJC10Q8IXB1 793 aa13.58□□□□□ -0.24
CTTNBP2-201ENST00000160373 KCNQ4P56696 695 aa13.58□□□□□ -0.24
CTTNBP2-201ENST00000160373 GSTO1P78417 241 aa13.58□□□□□ -0.24
CTTNBP2-201ENST00000160373 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
CTTNBP2-201ENST00000160373 CNNM3Q8NE01 707 aa13.58□□□□□ -0.24
CTTNBP2-201ENST00000160373 ARGLU1Q9NWB6 273 aaPredicted RBP13.58□□□□□ -0.24
CTTNBP2-201ENST00000160373 DTNBO60941 627 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms