RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 MATR3P43243 847 aaKnown RBP eCLIP18.27■□□□□ 0.518e-7■■■■□ 20.5
RB1CC1-201ENST00000025008 DNAJC25Q9H1X3 360 aa18.27■□□□□ 0.51
RB1CC1-201ENST00000025008 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.51
RB1CC1-201ENST00000025008 C6orf163Q5TEZ5 329 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 MEX3CQ5U5Q3 659 aaKnown RBP18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 ESYT1Q9BSJ8 1104 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 NLRP5P59047 1200 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 PIP4K2BP78356 416 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 TYRO3Q06418 890 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 ZFP91Q96JP5 570 aaPredicted RBP18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 RMND1Q9NWS8 449 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 TOP2BQ02880 1626 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 TCP11L1Q9NUJ3 509 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 SYT1P21579 422 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 FAM69CQ0P6D2 419 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 CCDC82Q8N4S0 544 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 A0A087WZG4 1122 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 EBAG9O00559 213 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 CCDC40Q4G0X9 1142 aa18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 NSRP1Q9H0G5 558 aaKnown RBP18.26■□□□□ 0.51
RB1CC1-201ENST00000025008 MYD88Q99836 296 aa18.25■□□□□ 0.51
RB1CC1-201ENST00000025008 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
RB1CC1-201ENST00000025008 FSD2A1L4K1 749 aa18.25■□□□□ 0.51
RB1CC1-201ENST00000025008 AOPEPQ8N6M6 819 aa18.25■□□□□ 0.51
RB1CC1-201ENST00000025008 CTNNBL1Q8WYA6 563 aaPredicted RBP18.25■□□□□ 0.51
RB1CC1-201ENST00000025008 ISM2Q6H9L7 571 aa18.25■□□□□ 0.51
RB1CC1-201ENST00000025008 CYB5RLQ6IPT4 315 aa18.25■□□□□ 0.51
RB1CC1-201ENST00000025008 NPHP3Q7Z494 1330 aa18.25■□□□□ 0.51
RB1CC1-201ENST00000025008 CCDC85AQ96PX6 553 aaPredicted RBP18.25■□□□□ 0.51
RB1CC1-201ENST00000025008 CATIPQ7Z7H3 387 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 HYPKQ9NX55 129 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 PDE1AP54750 535 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 TOM1L2Q6ZVM7 507 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 BMP15O95972 392 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 NOP2P46087 812 aaKnown RBP18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 CETN1Q12798 172 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 CCDC155Q8N6L0 562 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 CALML4Q96GE6 196 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 V9GYY5 206 aaPredicted RBP18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 CTAGE9A4FU28 777 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 METAP2P50579 478 aaKnown RBP eCLIP18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 TTC31Q49AM3 519 aaPredicted RBP18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 NBPF11Q86T75 865 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 MICALL1Q8N3F8 863 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 NCOA7Q8NI08 942 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 BRF1Q92994 677 aa18.24■□□□□ 0.51
RB1CC1-201ENST00000025008 TRIM21P19474 475 aaKnown RBP18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 UBA5Q9GZZ9 404 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 UBA7P41226 1012 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 TERF1P54274 439 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 INTS4Q96HW7 963 aaKnown RBP18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 ATRIPQ8WXE1 791 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 MKNK2Q9HBH9 465 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 NECAB1Q8N987 351 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 DNM1Q05193 864 aaKnown RBP18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 AMOTQ4VCS5 1084 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 KCNH5Q8NCM2 988 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 RANBP6O60518 1105 aaKnown RBP18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 PTGS1P23219 599 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 ANKRD44Q8N8A2 993 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 TRIM47Q96LD4 638 aa18.23■□□□□ 0.51
RB1CC1-201ENST00000025008 RALGAPBQ86X10 1494 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 SCAF11Q99590 1463 aaKnown RBP18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 EPRSP07814 1512 aaKnown RBP18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 IRX3P78415 501 aaPredicted RBP18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 RHPN1Q8TCX5 695 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 DDX12PQ92771 950 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 RASSF4Q9H2L5 321 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 STRN4Q9NRL3 753 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 FBF1Q8TES7 1133 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 PRPF4BQ13523 1007 aaKnown RBP18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 TNIP1Q15025 636 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 CEP63Q96MT8 703 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 IFIT5Q13325 482 aaKnown RBP18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 TMEM67Q5HYA8 995 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 LRRC27Q9C0I9 530 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
RB1CC1-201ENST00000025008 MACROD2A1Z1Q3 448 aa18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 TSHZ3Q63HK5 1081 aa18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 KIAA0753Q2KHM9 967 aa18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 NEBLO76041 1014 aa18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 IDEP14735 1019 aa18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 PROSER2Q86WR7 435 aaPredicted RBP18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 TACC1O75410 805 aa18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 MSL1Q68DK7 614 aa18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 RRAGDQ9NQL2 400 aaPredicted RBP18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 MYO1BO43795 1136 aa18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 SPATA24Q86W54 205 aa18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 ERO1AQ96HE7 468 aa18.21■□□□□ 0.51
RB1CC1-201ENST00000025008 STARD3NLO95772 234 aa18.2■□□□□ 0.5
RB1CC1-201ENST00000025008 CAVIN4Q5BKX8 364 aa18.2■□□□□ 0.5
RB1CC1-201ENST00000025008 ARFGAP2Q8N6H7 521 aa18.2■□□□□ 0.5
RB1CC1-201ENST00000025008 ATP2C2O75185 946 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms