RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 STX8Q9UNK0 236 aa12.93□□□□□ -0.34
RGPD5-201ENST00000016946 SBNO1A3KN83 1393 aa12.92□□□□□ -0.34
RGPD5-201ENST00000016946 NAA16Q6N069 864 aaPredicted RBP12.92□□□□□ -0.34
RGPD5-201ENST00000016946 RUFY1Q96T51 708 aa12.92□□□□□ -0.34
RGPD5-201ENST00000016946 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
RGPD5-201ENST00000016946 CCP110O43303 1012 aa12.92□□□□□ -0.34
RGPD5-201ENST00000016946 IARSP41252 1262 aaKnown RBP12.92□□□□□ -0.34
RGPD5-201ENST00000016946 PPP1R12BO60237 982 aaPredicted RBP12.92□□□□□ -0.34
RGPD5-201ENST00000016946 FAM98CQ17RN3 349 aaKnown RBP12.92□□□□□ -0.34
RGPD5-201ENST00000016946 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
RGPD5-201ENST00000016946 SCAND2PQ9GZW5 306 aaPredicted RBP12.92□□□□□ -0.34
RGPD5-201ENST00000016946 PARD3Q8TEW0 1356 aa12.92□□□□□ -0.34
RGPD5-201ENST00000016946 ANKRD2Q9GZV1 360 aa12.92□□□□□ -0.34
RGPD5-201ENST00000016946 DDX21Q9NR30 783 aaKnown RBP eCLIP12.92□□□□□ -0.34
RGPD5-201ENST00000016946 ARGLU1Q9NWB6 273 aaPredicted RBP12.91□□□□□ -0.34
RGPD5-201ENST00000016946 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 CNBD1Q8NA66 436 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 CBFA2T2O43439 604 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 PPP4R3BQ5MIZ7 849 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 TSHZ3Q63HK5 1081 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 USP21Q9UK80 565 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
RGPD5-201ENST00000016946 NF2P35240 595 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 CWF19L2Q2TBE0 894 aaKnown RBP12.91□□□□□ -0.34
RGPD5-201ENST00000016946 NOM1Q5C9Z4 860 aaKnown RBP12.91□□□□□ -0.34
RGPD5-201ENST00000016946 TXLNBQ8N3L3 684 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 SOS1Q07889 1333 aaPredicted RBP12.91□□□□□ -0.34
RGPD5-201ENST00000016946 PARP10Q53GL7 1025 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 NEK1Q96PY6 1258 aa12.91□□□□□ -0.34
RGPD5-201ENST00000016946 LTKP29376 864 aa12.9□□□□□ -0.34
RGPD5-201ENST00000016946 SLC4A8Q2Y0W8 1093 aa12.9□□□□□ -0.34
RGPD5-201ENST00000016946 CCDC178Q5BJE1 867 aa12.9□□□□□ -0.34
RGPD5-201ENST00000016946 TTC22Q5TAA0 569 aa12.9□□□□□ -0.34
RGPD5-201ENST00000016946 MICU3Q86XE3 530 aa12.9□□□□□ -0.34
RGPD5-201ENST00000016946 CCT2P78371 535 aaKnown RBP12.9□□□□□ -0.34
RGPD5-201ENST00000016946 SLC9C2Q5TAH2 1124 aa12.9□□□□□ -0.34
RGPD5-201ENST00000016946 ZNF790Q6PG37 636 aa12.9□□□□□ -0.34
RGPD5-201ENST00000016946 SLC4A4Q9Y6R1 1079 aa12.9□□□□□ -0.34
RGPD5-201ENST00000016946 TRAF1Q13077 416 aa12.9□□□□□ -0.34
RGPD5-201ENST00000016946 EDC4Q6P2E9 1401 aaKnown RBP12.9□□□□□ -0.35
RGPD5-201ENST00000016946 BAG4O95429 457 aaKnown RBP12.9□□□□□ -0.35
RGPD5-201ENST00000016946 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 VAMP4O75379 141 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 KRT24Q2M2I5 525 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 ESR2Q92731 530 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 MYO6Q9UM54 1294 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 TRIM21P19474 475 aaKnown RBP12.89□□□□□ -0.35
RGPD5-201ENST00000016946 GUCY1B3Q02153 619 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 HDAC1Q13547 482 aaPredicted RBP12.89□□□□□ -0.35
RGPD5-201ENST00000016946 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.89□□□□□ -0.35
RGPD5-201ENST00000016946 ACBD3Q9H3P7 528 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 TSPY3P0CV98 308 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 TSPY8P0CW00 308 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 HELBQ8NG08 1087 aaPredicted RBP12.89□□□□□ -0.35
RGPD5-201ENST00000016946 PICALMQ13492 652 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 TSPYL6Q8N831 410 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 KRT23Q9C075 422 aa12.89□□□□□ -0.35
RGPD5-201ENST00000016946 FAM43AQ8N2R8 423 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 VEZTQ9HBM0 779 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 BABAM1Q9NWV8 329 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 KIF21AQ7Z4S6 1674 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 PLCG2P16885 1265 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 MCM5P33992 734 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 METAP2P50579 478 aaKnown RBP eCLIP12.88□□□□□ -0.35
RGPD5-201ENST00000016946 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
RGPD5-201ENST00000016946 MPHOSPH6Q99547 160 aaKnown RBP12.88□□□□□ -0.35
RGPD5-201ENST00000016946 RSPH6AQ9H0K4 717 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 KIF20AO95235 890 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
RGPD5-201ENST00000016946 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
RGPD5-201ENST00000016946 PA2G4Q9UQ80 394 aaKnown RBP12.88□□□□□ -0.35
RGPD5-201ENST00000016946 ZFYVE16Q7Z3T8 1539 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 ARHGEF12Q9NZN5 1544 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 TBC1D9Q6ZT07 1266 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 SEPT11Q9NVA2 429 aaKnown RBP12.88□□□□□ -0.35
RGPD5-201ENST00000016946 ORC3Q9UBD5 711 aaPredicted RBP12.88□□□□□ -0.35
RGPD5-201ENST00000016946 SMTNL1A8MU46 457 aa12.88□□□□□ -0.35
RGPD5-201ENST00000016946 DESP17661 470 aa12.87□□□□□ -0.35
RGPD5-201ENST00000016946 PDE1AP54750 535 aa12.87□□□□□ -0.35
RGPD5-201ENST00000016946 EIF5P55010 431 aaKnown RBP12.87□□□□□ -0.35
RGPD5-201ENST00000016946 WTAPQ15007 396 aa12.87□□□□□ -0.35
RGPD5-201ENST00000016946 CNNM2Q9H8M5 875 aa12.87□□□□□ -0.35
RGPD5-201ENST00000016946 RBM26Q5T8P6 1007 aaKnown RBP12.87□□□□□ -0.35
RGPD5-201ENST00000016946 EIF2AK4Q9P2K8 1649 aaKnown RBP12.87□□□□□ -0.35
RGPD5-201ENST00000016946 BAG6P46379 1132 aa12.87□□□□□ -0.35
RGPD5-201ENST00000016946 MAP3K11Q16584 847 aa12.87□□□□□ -0.35
RGPD5-201ENST00000016946 TMTC2Q8N394 836 aa12.87□□□□□ -0.35
RGPD5-201ENST00000016946 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
RGPD5-201ENST00000016946 HOXB7P09629 217 aa12.87□□□□□ -0.35
RGPD5-201ENST00000016946 UBA5Q9GZZ9 404 aa12.87□□□□□ -0.35
RGPD5-201ENST00000016946 IL13P35225 146 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 CCDC144CPQ8IYA2 1237 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 HSP90B2PQ58FF3 399 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 CCDC87Q9NVE4 849 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 YEATS2Q9ULM3 1422 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms