RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CCDC192P0DO97 292 aa14.28□□□□□ -0.12
TSPAN9-201ENST00000011898 KRT222Q8N1A0 295 aa14.28□□□□□ -0.12
TSPAN9-201ENST00000011898 CENPHQ9H3R5 247 aa14.28□□□□□ -0.12
TSPAN9-201ENST00000011898 NRKQ7Z2Y5 1582 aa14.28□□□□□ -0.12
TSPAN9-201ENST00000011898 KRT24Q2M2I5 525 aa14.27□□□□□ -0.12
TSPAN9-201ENST00000011898 CCDC70Q6NSX1 233 aa14.27□□□□□ -0.12
TSPAN9-201ENST00000011898 RUFY1Q96T51 708 aa14.27□□□□□ -0.12
TSPAN9-201ENST00000011898 TRIM35Q9UPQ4 493 aa14.27□□□□□ -0.12
TSPAN9-201ENST00000011898 FILIP1Q7Z7B0 1213 aa14.27□□□□□ -0.12
TSPAN9-201ENST00000011898 CERS3Q8IU89 383 aa14.27□□□□□ -0.12
TSPAN9-201ENST00000011898 DDX54Q8TDD1 881 aaKnown RBP14.27□□□□□ -0.12
TSPAN9-201ENST00000011898 GDPD2Q9HCC8 539 aa14.27□□□□□ -0.12
TSPAN9-201ENST00000011898 RAB11FIP3O75154 756 aa14.27□□□□□ -0.13
TSPAN9-201ENST00000011898 AKAP17AQ02040 695 aaKnown RBP14.27□□□□□ -0.13
TSPAN9-201ENST00000011898 FERMT3Q86UX7 667 aa14.27□□□□□ -0.13
TSPAN9-201ENST00000011898 LTBP4Q8N2S1 1624 aa14.27□□□□□ -0.13
TSPAN9-201ENST00000011898 ZBTB7BO15156 539 aaPredicted RBP14.27□□□□□ -0.13
TSPAN9-201ENST00000011898 ANKRD1Q15327 319 aa14.27□□□□□ -0.13
TSPAN9-201ENST00000011898 FAM177A1Q8N128 213 aaPredicted RBP14.27□□□□□ -0.13
TSPAN9-201ENST00000011898 USP19O94966 1318 aa14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 IL13P35225 146 aa14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 KINO60870 393 aaKnown RBP14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 CCDC191Q8NCU4 936 aa14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 ZSCAN31Q96LW9 406 aaPredicted RBP14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 LARP6Q9BRS8 491 aaKnown RBP14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 DCTPP1Q9H773 170 aa14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 DCAF8L1A6NGE4 600 aa14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 PES1O00541 588 aaKnown RBP14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 CDR1P51861 262 aa14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 CCDC83Q8IWF9 413 aa14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 TRMT2AQ8IZ69 625 aaKnown RBP14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 FMNL2Q96PY5 1086 aa14.26□□□□□ -0.13
TSPAN9-201ENST00000011898 ZNF521Q96K83 1311 aa14.25□□□□□ -0.13
TSPAN9-201ENST00000011898 KIAA0754O94854 1291 aa14.25□□□□□ -0.13
TSPAN9-201ENST00000011898 PDE1AP54750 535 aa14.25□□□□□ -0.13
TSPAN9-201ENST00000011898 PRPF40BQ6NWY9 871 aaKnown RBP14.25□□□□□ -0.13
TSPAN9-201ENST00000011898 NFXL1Q6ZNB6 911 aa14.25□□□□□ -0.13
TSPAN9-201ENST00000011898 ARHGEF25Q86VW2 580 aa14.25□□□□□ -0.13
TSPAN9-201ENST00000011898 ANKRD24Q8TF21 1146 aa14.25□□□□□ -0.13
TSPAN9-201ENST00000011898 PNPLA6Q8IY17 1366 aa14.25□□□□□ -0.13
TSPAN9-201ENST00000011898 C10orf67Q8IYJ2 551 aa14.25□□□□□ -0.13
TSPAN9-201ENST00000011898 TNMDQ9H2S6 317 aa14.25□□□□□ -0.13
TSPAN9-201ENST00000011898 MNAT1P51948 309 aa14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 NOLC1Q14978 699 aaKnown RBP eCLIP14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 PIK3C2AO00443 1686 aa14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 G3V3G9 751 aa14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 TATP17735 454 aaPredicted RBP14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 DCAF8Q5TAQ9 597 aa14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 DNAAF4Q8WXU2 420 aa14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 NGLY1Q96IV0 654 aa14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 TMX1Q9H3N1 280 aa14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 CHRNA2Q15822 529 aa14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 SPG7Q9UQ90 795 aa14.24□□□□□ -0.13
TSPAN9-201ENST00000011898 TMX3Q96JJ7 454 aa14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 PXDNQ92626 1479 aa14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 PTPN14Q15678 1187 aa14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 PPP1R42Q7Z4L9 355 aa14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 PLEKHM2Q8IWE5 1019 aa14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 RBM27Q9P2N5 1060 aaKnown RBP14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 ERCC4Q92889 916 aaPredicted RBP14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 CCDC102AQ96A19 550 aa14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 NAT10Q9H0A0 1025 aaKnown RBP14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 BOLA2Q9H3K6 86 aa14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 IQSEC2Q5JU85 1478 aa14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 MAP2P11137 1827 aaKnown RBP14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 XIRP1Q702N8 1843 aaKnown RBP14.23□□□□□ -0.13
TSPAN9-201ENST00000011898 MPRIPQ6WCQ1 1025 aa14.22□□□□□ -0.13
TSPAN9-201ENST00000011898 SPATA32Q96LK8 384 aa14.22□□□□□ -0.13
TSPAN9-201ENST00000011898 LIMCH1Q9UPQ0 1083 aa14.22□□□□□ -0.13
TSPAN9-201ENST00000011898 RAB3GAP1Q15042 981 aa14.22□□□□□ -0.13
TSPAN9-201ENST00000011898 TOM1L2Q6ZVM7 507 aa14.22□□□□□ -0.13
TSPAN9-201ENST00000011898 PI4KAP2A4QPH2 592 aa14.22□□□□□ -0.13
TSPAN9-201ENST00000011898 PI4KAP1Q8N8J0 262 aa14.22□□□□□ -0.13
TSPAN9-201ENST00000011898 TTC12Q9H892 705 aaPredicted RBP14.22□□□□□ -0.13
TSPAN9-201ENST00000011898 LMAN1P49257 510 aa14.22□□□□□ -0.13
TSPAN9-201ENST00000011898 SMC2O95347 1197 aa14.21□□□□□ -0.13
TSPAN9-201ENST00000011898 CEP85Q6P2H3 762 aa14.21□□□□□ -0.13
TSPAN9-201ENST00000011898 PDILTQ8N807 584 aa14.21□□□□□ -0.13
TSPAN9-201ENST00000011898 TSC1Q92574 1164 aa14.21□□□□□ -0.13
TSPAN9-201ENST00000011898 NUP62CLQ9H1M0 184 aa14.21□□□□□ -0.13
TSPAN9-201ENST00000011898 ANXA1P04083 346 aa14.21□□□□□ -0.13
TSPAN9-201ENST00000011898 TPM1P09493 284 aa14.21□□□□□ -0.13
TSPAN9-201ENST00000011898 U2AF2P26368 475 aaKnown RBP eCLIP14.21□□□□□ -0.13
TSPAN9-201ENST00000011898 KIAA0232Q92628 1395 aa14.21□□□□□ -0.14
TSPAN9-201ENST00000011898 EIF3JO75822 258 aaKnown RBP14.21□□□□□ -0.14
TSPAN9-201ENST00000011898 CCDC8Q9H0W5 538 aaPredicted RBP14.21□□□□□ -0.14
TSPAN9-201ENST00000011898 TDO2P48775 406 aa14.2□□□□□ -0.14
TSPAN9-201ENST00000011898 ZSCAN23Q3MJ62 389 aa14.2□□□□□ -0.14
TSPAN9-201ENST00000011898 EYA1Q99502 592 aa14.2□□□□□ -0.14
TSPAN9-201ENST00000011898 KDM4AO75164 1064 aa14.2□□□□□ -0.14
TSPAN9-201ENST00000011898 ME1P48163 572 aa14.2□□□□□ -0.14
TSPAN9-201ENST00000011898 TSR1Q2NL82 804 aaKnown RBP14.2□□□□□ -0.14
TSPAN9-201ENST00000011898 DBF4Q9UBU7 674 aaPredicted RBP14.2□□□□□ -0.14
TSPAN9-201ENST00000011898 SAFBQ15424 915 aaKnown RBP eCLIP14.2□□□□□ -0.14
TSPAN9-201ENST00000011898 KIF18AQ8NI77 898 aa14.2□□□□□ -0.14
TSPAN9-201ENST00000011898 BMS1Q14692 1282 aaKnown RBP14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 STK38Q15208 465 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 DDX11Q96FC9 970 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 RASSF4Q9H2L5 321 aa14.19□□□□□ -0.14
TSPAN9-201ENST00000011898 ADCY5O95622 1261 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms