RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Gm973E9Q295 1059 aa20.65■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Sp8Q8BMJ8 486 aa20.65■□□□□ 0.9
Ckap4-202ENSMUST00000167671 GckrQ91X44 587 aa20.65■□□□□ 0.9
Ckap4-202ENSMUST00000167671 D430041D05RikF6ZGR6 1678 aa20.65■□□□□ 0.9
Ckap4-202ENSMUST00000167671 AceP09470 1312 aa20.64■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Mybbp1aQ7TPV4 1344 aaKnown RBP20.64■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Pde3bQ61409 1100 aa20.64■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Atf7Q8R0S1 413 aa20.64■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Bicd2Q921C5 820 aa20.64■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Psma5Q9Z2U1 241 aaKnown RBP20.64■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Cfap157Q0VFX2 523 aa20.64■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Ubash3aQ3V3E1 624 aa20.64■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Ubxn10Q8BG34 277 aa20.64■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Irf9Q61179 399 aa20.63■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Kiaa0754Q69ZZ9 979 aa20.63■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Ano6Q6P9J9 911 aa20.63■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Ppp6r1Q7TSI3 856 aa20.63■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Lmbr1lQ9D1E5 489 aa20.63■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Irx4Q9QY61 515 aa20.63■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Mon2Q80TL7 1715 aa20.63■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Oas2E9Q9A9 742 aa20.63■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Zfp251Q6PCX8 632 aa20.63■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Atp2b3Q0VF55 1220 aa20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Lins1Q3U1D0 764 aa20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 PsapQ61207 557 aaKnown RBP20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Sass6Q80UK7 654 aa20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Rps6kb1Q8BSK8 525 aa20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Iffo2Q8R2V2 512 aa20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Nop14Q8R3N1 860 aaKnown RBP20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Sh3bgrQ9WUZ7 214 aa20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Grm8P47743 908 aa20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Ppfia3P60469 1194 aa20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Dixdc1Q80Y83 711 aa20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Cep57l1Q8VDS7 400 aa20.62■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Rnf20Q5DTM8 973 aa20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Rab3gap1Q80UJ7 981 aa20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Plcd1Q8R3B1 756 aa20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 ZwintQ9CQU5 252 aa20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Nup153E9Q3G8 1462 aaKnown RBP20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Neurod6P48986 337 aa20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Ctdnep1Q3TP92 244 aa20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Dnajc10Q9DC23 793 aa20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Krt85Q9Z2T6 507 aa20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 C5P06684 1680 aa20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Aox1O54754 1333 aa20.61■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Kansl3A2RSY1 903 aaKnown RBP20.6■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Hspa2P17156 633 aa20.6■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Rad17Q6NXW6 688 aa20.6■□□□□ 0.89
Ckap4-202ENSMUST00000167671 SympkQ80X82 1284 aa20.6■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Hmx1O70218 332 aa20.6■□□□□ 0.89
Ckap4-202ENSMUST00000167671 RdxP26043 583 aaKnown RBP20.6■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Ano8Q6PB70 1060 aa20.6■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Eif3aP23116 1344 aaKnown RBP20.6■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Larp1Q6ZQ58 1072 aaKnown RBP20.59■□□□□ 0.89
Ckap4-202ENSMUST00000167671 CrebrfQ8CDG5 640 aaKnown RBP20.59■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Zpr1Q62384 459 aa20.59■□□□□ 0.89
Ckap4-202ENSMUST00000167671 SnrkQ8VDU5 748 aa20.59■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Atp10bB1AWN4 1474 aa20.59■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Tpm3P21107 285 aaKnown RBP20.58■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Igfbp6P47880 238 aa20.58■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Mst1rQ62190 1378 aa20.58■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Als2Q920R0 1651 aa20.58■□□□□ 0.89
Ckap4-202ENSMUST00000167671 Ano1Q8BHY3 960 aa20.57■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Atp8b3Q6UQ17 1335 aa20.57■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Flt4P35917 1363 aa20.57■□□□□ 0.88
Ckap4-202ENSMUST00000167671 U2af2P26369 475 aaKnown RBP20.57■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Cdkn1cP49919 348 aa20.57■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Frmd3Q8BHD4 595 aa20.57■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Ttc27Q8CD92 847 aa20.57■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Gm45140A0A0N4SUM8 220 aa20.57■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Plcd3Q8K2J0 785 aa20.57■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Hmgn5Q9JL35 406 aa20.57■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Ifit1Q64282 463 aa20.56■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Rassf8Q8CJ96 419 aa20.56■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Arap3Q8R5G7 1538 aa20.56■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Aox2Q5SGK3 1345 aa20.56■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Srgap1Q91Z69 1062 aa20.56■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Kiaa0232Q80U59 1396 aaKnown RBP20.55■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Abcc12Q80WJ6 1366 aa20.55■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Stat1P42225 749 aa20.55■□□□□ 0.88
Ckap4-202ENSMUST00000167671 TrhQ62361 256 aa20.55■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Kdm6aO70546 1401 aa20.55■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Klhl34A2AI76 644 aa20.55■□□□□ 0.88
Ckap4-202ENSMUST00000167671 1700113H08RikE9Q9Q5 327 aa20.55■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Kiaa0753Q6A000 959 aa20.55■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Card6E9PWH2 1175 aa20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Dhx38Q80X98 1228 aa20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Ppp1r37Q8BKR5 712 aa20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Nlrp3Q8R4B8 1033 aa20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Adam1bQ8R534 806 aa20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 StrbpQ91WM1 672 aaKnown RBP20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Gm10471E9Q1C7 252 aa20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Adora1Q60612 326 aa20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 HellsQ60848 821 aa20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Syt10Q9R0N4 523 aa20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Sh3bp5Q9Z131 463 aa20.54■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Irgm2A0A140LIF8 407 aa20.53■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Arid5bQ8BM75 1188 aaKnown RBP20.53■□□□□ 0.88
Ckap4-202ENSMUST00000167671 R3hcc1Q8BSI6 488 aa20.53■□□□□ 0.88
Ckap4-202ENSMUST00000167671 Ifi35Q9D8C4 286 aa20.53■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms