RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Sbno1Q689Z5 1390 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ttll12Q3UDE2 639 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 DonsonQ9QXP4 560 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Kdm5bQ80Y84 1544 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Frmpd2A0A140LI67 1392 aa13.48□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Zfpm1O35615 995 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Zfp397Q7TNK4 527 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 DymQ8CHY3 669 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Pet2A2AHY8 747 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Oas2E9Q9A9 742 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Cfap157Q0VFX2 523 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Cdkl5Q3UTQ8 938 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ubash3aQ3V3E1 624 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ctr9Q62018 1173 aaKnown RBP13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Mrps27Q8BK72 415 aaKnown RBP13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 ImmtQ8CAQ8 757 aaKnown RBP13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 PxdnQ3UQ28 1475 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 NapbP28663 298 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Frat2Q8K025 231 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Srgap1Q91Z69 1062 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Atp1a2Q6PIE5 1020 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Klhl30Q8C3F7 581 aa13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Mrpl44Q9CY73 333 aaKnown RBP13.47□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Tti2Q8BGV4 512 aa13.46□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Wdr3Q8BHB4 942 aaKnown RBP13.46□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Sil1Q9EPK6 465 aa13.46□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Dnajc25A2ALW5 357 aa13.46□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Smarcc1P97496 1104 aa13.46□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Ppp6r3Q922D4 844 aa13.46□□□□□ -0.25
Ndc1-204ENSMUST00000139560 Zkscan4Q5SZT6 480 aa13.46□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Cyp4f39Q8BGU0 532 aa13.46□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Als2cr12Q8BVM7 383 aa13.46□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Edc3Q8K2D3 508 aaKnown RBP13.46□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ccdc112A0AUP1 442 aa13.46□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Lonp2Q9DBN5 852 aa13.46□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Pik3ap1Q9EQ32 811 aa13.46□□□□□ -0.26
Ndc1-204ENSMUST00000139560 RalgapbQ8BQZ4 1484 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Atp1a3Q6PIC6 1013 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Fam76aQ922G2 307 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Sf3a3Q9D554 501 aaKnown RBP13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Lztfl1Q9JHQ5 299 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Fancd2Q80V62 1450 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Rbbp8nlA2ABX0 614 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 NmiO35309 314 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Exoc5Q3TPX4 708 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Mipol1Q9D9F8 279 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Cyp26c1B2RXA7 518 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Lmbrd2Q8C561 694 aa13.45□□□□□ -0.26
Ndc1-204ENSMUST00000139560 GmnnO88513 206 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 CalrP14211 416 aaKnown RBP13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Gimap5Q8BWF2 308 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Dnajc10Q9DC23 793 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ift122Q6NWV3 1182 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Slc5a4bQ91ZP4 660 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Mug2P28666 1451 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Tpx2A2APB8 745 aaKnown RBP13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Adck5Q80V03 582 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ccdc150Q8CDI7 1110 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Lmbr1lQ9D1E5 489 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Elf2Q9JHC9 593 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ifit1bl2Q3U687 466 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 LratQ9JI60 231 aa13.44□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Dapk3O54784 448 aa13.43□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Nip7Q9CXK8 180 aaKnown RBP13.43□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ktn1Q61595 1327 aaKnown RBP13.43□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Bach2P97303 839 aa13.43□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Eif4a2P10630 407 aa13.43□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ifit1Q64282 463 aa13.43□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Anp32cQ64G17 123 aa13.43□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Lmod1Q8BVA4 595 aa13.43□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Sun3Q5SS91 320 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Mum1Q6DID5 682 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ccdc82Q6PG04 518 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Cc2d1bQ8BRN9 848 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Stx8O88983 236 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Mtmr3Q8K296 1196 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Lrrc2Q8VDB8 371 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 NsmfQ99NF2 532 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ifit2Q64112 472 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Cyp7a1Q64505 503 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Lmbr1Q9JIT0 490 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Atp8b2P98199 1209 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 EspnlQ3UYR4 1005 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Abcf1Q6P542 837 aaKnown RBP13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ppm1eQ80TL0 749 aa13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ppfibp1Q8C8U0 969 aaKnown RBP13.42□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Aldh8a1Q8BH00 487 aa13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 TxlnbQ8VBT1 685 aa13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Naip7Q9JIB3 1402 aa13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Naip6Q9JIB6 1403 aa13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Echdc1Q9D9V3 322 aa13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Ak2Q9WTP6 239 aa13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Metap2O08663 478 aaKnown RBP13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Hdhd2Q3UGR5 259 aa13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Gnat3Q3V3I2 354 aa13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Erlin2Q8BFZ9 340 aa13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Riok1Q922Q2 567 aa13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Cdk13Q69ZA1 1511 aaKnown RBP13.41□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Cnga2Q62398 664 aa13.4□□□□□ -0.26
Ndc1-204ENSMUST00000139560 Disp1Q3TDN0 1521 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms