RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Krt23Q99PS0 422 aa12.09□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Atp6v1aP50516 617 aaKnown RBP12.09□□□□□ -0.47
Rtn3-204ENSMUST00000088171 SltmQ8CH25 1031 aaKnown RBP12.09□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ssx2ipQ8VC66 615 aa12.09□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Sept7O55131 436 aa12.09□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Stk11ipQ3TAA7 1072 aa12.09□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Secisbp2lQ6A098 1086 aaKnown RBP12.09□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Serpina10Q8R121 448 aa12.09□□□□□ -0.47
Rtn3-204ENSMUST00000088171 Ampd3O08739 766 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Atp2b3Q0VF55 1220 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 MpndQ3TV65 487 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Krt7Q9DCV7 457 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Tacc1Q6Y685 774 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Q7TT23 1179 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Triml1Q8BVP1 470 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Znf131Q8K3J5 619 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Krt25Q8VCW2 446 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Znf608Q56A10 1511 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Gli2Q0VGT2 1544 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Kif11Q6P9P6 1052 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Echdc1Q9D9V3 322 aa12.08□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Map3k2Q61083 619 aa12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Glt1d1A4FUP9 346 aa12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Usp25P57080 1055 aa12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Gtf3c3Q3TMP1 882 aa12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Nop9Q8BMC4 636 aaKnown RBP12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 MthfsQ9D110 203 aa12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 CarsQ9ER72 831 aaKnown RBP12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Stk32bQ9JJX8 414 aa12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Chpf2Q3UU43 768 aa12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Jade2Q6ZQF7 829 aa12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Ppp1r42Q8R1Z4 357 aa12.07□□□□□ -0.48
Rtn3-204ENSMUST00000088171 TprnA2AI08 749 aaKnown RBP12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Cdkn1cP49919 348 aa12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Zbtb3Q91X45 518 aa12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Prkrip1Q9CWV6 186 aaKnown RBP12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Tfip11Q9ERA6 838 aaKnown RBP12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Naip7Q9JIB3 1402 aa12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Cwc15Q9JHS9 229 aaKnown RBP12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Mroh7A2AVR2 1279 aa12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Fbxo41Q6NS60 873 aa12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Podxl2Q8CAE9 603 aa12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Aldh1l1Q8R0Y6 902 aa12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Foxo3Q9WVH4 672 aa12.06□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Gm44503E9PYU5 387 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Cog6Q8R3I3 657 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Pkd2l2Q9JLG4 621 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Hfm1D3Z4R1 1434 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 WizO88286 1684 aaKnown RBP12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Gpatch8A2A6A1 1505 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Zfp853A0A1D5RM95 733 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Cavin1O54724 392 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Trap1aP19473 224 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Sdc2P43407 202 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Cnnm2Q3TWN3 875 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Myl6bQ8CI43 207 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Gnl2Q99LH1 728 aaKnown RBP12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Naa16Q9DBB4 864 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Kmt5bQ3U8K7 883 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Kdm8Q9CXT6 414 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Fam213aQ9CYH2 218 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Pmfbp1Q9WVQ0 1022 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Zfyve16Q80U44 1528 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Polr3aB2RXC6 1390 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 TnnQ80Z71 1560 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Nf2P46662 596 aa12.05□□□□□ -0.48
Rtn3-204ENSMUST00000088171 BC005561E9Q5E2 1589 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Tiam1Q60610 1591 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 IntuQ059U7 942 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 IqcgQ80W32 419 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Bst2Q8R2Q8 172 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Tmod4Q9JLH8 345 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Abcc2Q8VI47 1543 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Sp4Q62445 782 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Vmn1r199Q8R280 367 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Luzp1Q8R4U7 1068 aaKnown RBP12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Haus2Q9CQS9 234 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Eid1Q9DCR4 169 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 WtapQ9ER69 396 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Yeats2Q3TUF7 1407 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Dennd3A2RT67 1274 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Akap2O54931 893 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Kif5bQ61768 963 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Slain2Q8CI08 581 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Ccdc112A0AUP1 442 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Ttll13A4Q9F6 804 aa12.04□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Uggt2E9Q4X2 1504 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Vti1aO89116 217 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Prkar2bP31324 416 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Limch1Q3UH68 1057 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Krt15Q61414 452 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Slc4a8Q8JZR6 1089 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Taf7Q9R1C0 341 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Snapc4Q8BP86 1333 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Otud7bB2RUR8 840 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Exoc3Q6KAR6 755 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Ccdc191J3QQ27 883 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Krt13P08730 437 aa12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Parp1P11103 1013 aaKnown RBP12.03□□□□□ -0.48
Rtn3-204ENSMUST00000088171 Caprin2Q05A80 1031 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms