RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Etf1Q8BWY3 437 aaKnown RBP11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Bicdl2Q8CHW5 507 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Sugt1Q9CX34 336 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Mast1Q9R1L5 1570 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Aox4Q3TYQ9 1336 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Nsd3Q6P2L6 1439 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Tulp4Q9JIL5 1547 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ddr1Q03146 911 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Atp8b1Q148W0 1251 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Naif1Q6PFD7 327 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ano10Q8BH79 659 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Znf526Q8BI66 675 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ciz1Q8VEH2 845 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Gps2Q921N8 327 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 WizO88286 1684 aaKnown RBP11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Ehbp1l1Q99MS7 1716 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Mapkbp1Q6NS57 1503 aa11.34□□□□□ -0.59
Hmgb1-201ENSMUST00000085546 Apaf1O88879 1249 aa11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Nol8Q3UHX0 1147 aaKnown RBP11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 LnpkQ7TQ95 425 aa11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 NaspQ99MD9 773 aaKnown RBP11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Ribc1Q9D0B8 379 aa11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Uhrf1bp1B2KF50 1429 aa11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Scaf11E9PZM7 1456 aaKnown RBP11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Cwc27Q3TKY6 469 aa11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Jakmip1Q8BVL9 626 aa11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Gnai3Q9DC51 354 aa11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Osbpl5Q9ER64 874 aa11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 P2rx7Q9Z1M0 595 aa11.33□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 NpcdF8VQB8 469 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Cplx2P84086 134 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Dusp9Q7TNL7 452 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Q9D2X8 372 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Ccdc39Q9D5Y1 937 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Cbx8Q9QXV1 362 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Rsrc2A2RTL5 376 aaKnown RBP11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Pde11aP0C1Q2 933 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Ints3Q7TPD0 1041 aaKnown RBP11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Cfap100Q80VN0 613 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Ccdc73Q8CDM4 1066 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 FanclQ9CR14 375 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Klc4Q9DBS5 619 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Tpcn1Q9EQJ0 817 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Zbtb22Q9Z0G7 638 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Znf541Q0GGX2 1363 aa11.32□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Dhx8A2A4P0 1244 aaKnown RBP11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Evi5lH3BKQ3 813 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Sf3b2Q3UJB0 878 aaKnown RBP11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Rap1gap2Q5SVL6 712 aaKnown RBP11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 PrimpolQ6P1E7 537 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Znrd1-asQ8R0E5 213 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Kcnk13Q8R1P5 405 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 TxlnbQ8VBT1 685 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Rnf17Q99MV7 1640 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 InsrP15208 1372 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Msh6P54276 1358 aaKnown RBP11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Gm3409A0A0G2JE67 319 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 A0A1L1SQF0 893 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Gnai1B2RSH2 354 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 C2cd2E9Q3C1 696 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 EappQ5BU09 281 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Gnl3lQ6PGG6 577 aaKnown RBP11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Tcp11l1Q8BTG3 509 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Spats2Q8K1N4 545 aaKnown RBP11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 4930519G04RikQ9CPT7 205 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 MicalclQ9D5U9 680 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 SyncQ9EPM5 470 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Atp8b3Q6UQ17 1335 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 WrnO09053 1401 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Polr3gQ6NXY9 223 aa11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Ddx27Q921N6 760 aaKnown RBP11.31□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 PaskQ8CEE6 1383 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Cep131Q62036 1060 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Pdzrn3Q69ZS0 1063 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Prkag3Q8BGM7 489 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Q8C1R3 189 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Cd109Q8R422 1442 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Gm15262A0A140LIQ5 728 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Mctp1E9PV86 951 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Exoc5Q3TPX4 708 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Hspa4Q61316 841 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Ncoa7Q6DFV7 943 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Dnm3Q8BZ98 863 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Sugp2Q8CH09 1067 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Lmbr1Q9JIT0 490 aa11.3□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Grik3B1AS29 919 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 1700006A11RikB9EHI3 544 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Nf2P46662 596 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 NeblQ0II04 452 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Lins1Q3U1D0 764 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Elf1Q60775 612 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Osbpl1aQ91XL9 950 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 PpanQ91YU8 470 aaKnown RBP11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Zbtb12Q9Z150 459 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Cep152A2AUM9 1736 aaKnown RBP11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Talpid3E9PV87 1520 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Mdh1P14152 334 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Kifap3P70188 793 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Esyt1Q3U7R1 1092 aaKnown RBP11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Gle1Q8R322 699 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms