RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Nfe2l3Q9WTM4 660 aa13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Eif4a2P10630 407 aa13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Ube2hP62257 183 aa13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Ccdc178Q8CDV0 866 aa13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Zranb2Q9R020 330 aaKnown RBP13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Vwa3bJ9JI28 736 aa13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Surf1P09925 306 aa13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Hmgn5Q9JL35 406 aa13.44□□□□□ -0.26
Ssh1-201ENSMUST00000077689 PtpruB1AUH1 1446 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Zkscan16A2ALW2 728 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Hoxb7P09024 217 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Nbr1P97432 988 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Ube2oQ6ZPJ3 1288 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Tmco3Q8BH01 678 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Vps18Q8R307 973 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Zc3h13E9Q784 1729 aaKnown RBP13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Nsd3Q6P2L6 1439 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Nwd1A6H603 1563 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Nap1l2P51860 460 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Nucb1Q02819 459 aaKnown RBP13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Cwc27Q3TKY6 469 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Cabp4Q8VHC5 271 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Mageb16Q9CWV4 363 aa13.43□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Pdia3P27773 505 aaKnown RBP13.42□□□□□ -0.26
Ssh1-201ENSMUST00000077689 LifrP42703 1092 aa13.42□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Dpf1Q9QX66 387 aa13.42□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Kri1Q8VDQ9 704 aaKnown RBP13.42□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Prc1Q99K43 603 aaKnown RBP13.42□□□□□ -0.26
Ssh1-201ENSMUST00000077689 MyclP10166 368 aa13.42□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Mcm5P49718 733 aa13.42□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Uri1Q3TLD5 531 aa13.42□□□□□ -0.26
Ssh1-201ENSMUST00000077689 RictorQ6QI06 1708 aa13.41□□□□□ -0.26
Ssh1-201ENSMUST00000077689 PzpQ61838 1495 aa13.41□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Rtf1A2AQ19 715 aaKnown RBP13.41□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Cnbd1B1AWM0 430 aa13.41□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Prpf38aQ4FK66 312 aaKnown RBP13.41□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Fhod1Q6P9Q4 1197 aa13.41□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Ric3Q8BPM6 367 aa13.41□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Atp7bQ64446 1462 aa13.41□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Elp1Q7TT37 1333 aaKnown RBP13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Gm21190A0A0G2JGJ6 266 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Ddx49Q4FZF3 480 aaKnown RBP13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Lrrc8aQ80WG5 810 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Snw1Q9CSN1 536 aaKnown RBP13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Znf541Q0GGX2 1363 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Kifc2O08672 792 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Tyro3P55144 880 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Coro7Q9D2V7 922 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 PdcQ9QW08 244 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Klra5Q60652 266 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Smarcc2Q6PDG5 1213 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Wdr24Q8CFJ9 790 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Dact1Q8R4A3 778 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 PplQ9R269 1755 aa13.4□□□□□ -0.26
Ssh1-201ENSMUST00000077689 Atp6v1dP57746 247 aa13.39□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Kcnb1Q03717 857 aa13.39□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Q9CYI0 393 aa13.39□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Slc5a4aQ9ET37 656 aa13.39□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Ap3b2Q9JME5 1082 aa13.39□□□□□ -0.27
Ssh1-201ENSMUST00000077689 TmpoQ61033 693 aaKnown RBP13.39□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Naif1Q6PFD7 327 aa13.39□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Gm3409A0A0G2JE67 319 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Ankrd44B2RXR6 993 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Zmym1Q3TJB1 983 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Wdr93Q402B2 695 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Mrps27Q8BK72 415 aaKnown RBP13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Q9D2X8 372 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Tpcn1Q9EQJ0 817 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Gtf2f1Q3THK3 508 aaKnown RBP13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Mum1Q6DID5 682 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Wdr60Q8C761 999 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Ddx27Q921N6 760 aaKnown RBP13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Gemin5Q8BX17 1502 aaKnown RBP13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Astn2Q80Z10 1352 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Ggnbp2Q5SV77 696 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Nup88Q8CEC0 753 aaKnown RBP13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Q8CEZ4 452 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Sh2b1Q91ZM2 756 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Spata31d1bE9QA57 1361 aa13.38□□□□□ -0.27
Ssh1-201ENSMUST00000077689 EvcP57680 1005 aa13.37□□□□□ -0.27
Ssh1-201ENSMUST00000077689 GclcP97494 637 aa13.37□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Dennd6aQ8BH65 605 aa13.37□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Sos1Q62245 1319 aa13.37□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Gm10563F6WIE4 79 aa13.37□□□□□ -0.27
Ssh1-201ENSMUST00000077689 CgnP59242 1191 aa13.37□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Efcab8Q8C9R9 203 aa13.37□□□□□ -0.27
Ssh1-201ENSMUST00000077689 AvenQ9D9K3 342 aa13.37□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Cnpy2Q9QXT0 182 aa13.37□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Dip2bQ3UH60 1574 aa13.37□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Idi1P58044 227 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Mcm2P97310 904 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Ccdc57Q6PHN1 1016 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Eif3cQ8R1B4 911 aaKnown RBP13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Zeb2Q9R0G7 1215 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Usp32F8VPZ3 1604 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Eif4g2Q62448 906 aaKnown RBP13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Cavin2Q63918 418 aaKnown RBP13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Znf653Q6YND2 615 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Ccdc186Q8C9S4 917 aa13.36□□□□□ -0.27
Ssh1-201ENSMUST00000077689 Mad1l1Q9WTX8 717 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms