RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Jakmip1Q8BVL9 626 aa13.63□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Brpf1B2RRD7 1212 aa13.62□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Dnajc2P54103 621 aaKnown RBP13.62□□□□□ -0.23
Ddx55-201ENSMUST00000071057 EspnlQ3UYR4 1005 aa13.62□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Brf1Q8CFK2 676 aa13.62□□□□□ -0.23
Ddx55-201ENSMUST00000071057 DccP70211 1447 aa13.62□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Mum1Q6DID5 682 aa13.62□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Zfp251Q6PCX8 632 aa13.62□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Abcc4E9Q236 1325 aa13.62□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Ubr2Q6WKZ8 1755 aa13.61□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Nol8Q3UHX0 1147 aaKnown RBP13.61□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Zbtb12Q9Z150 459 aa13.61□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Ints5Q8CHT3 1018 aa13.61□□□□□ -0.23
Ddx55-201ENSMUST00000071057 MypnQ5DTJ9 1315 aa13.61□□□□□ -0.23
Ddx55-201ENSMUST00000071057 1700122O11RikJ3QPW6 241 aa13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Mrps27Q8BK72 415 aaKnown RBP13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Pmfbp1Q9WVQ0 1022 aa13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 MccE9PWI3 1003 aa13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 GpkowQ56A08 488 aa13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Flad1Q8R123 492 aa13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 ZgpatQ8VDM1 511 aa13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Adora1Q60612 326 aa13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Soga3Q6NZL0 945 aa13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Ercc6lQ8BHK9 1240 aa13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Fam177a1Q8BR63 207 aa13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.6□□□□□ -0.23
Ddx55-201ENSMUST00000071057 VgfQ0VGU4 617 aa13.59□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Fam228bQ497Q6 232 aa13.59□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Ccdc38Q8CDN8 563 aa13.59□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Mlh1Q9JK91 760 aa13.59□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Tjp1P39447 1745 aaKnown RBP13.59□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Lmod3E9QA62 571 aa13.59□□□□□ -0.23
Ddx55-201ENSMUST00000071057 4930504O13RikQ8C5Z9 145 aa13.59□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Gtpbp4Q99ME9 634 aaKnown RBP13.59□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Ddx60E9PZQ1 1711 aa13.58□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Fkbp5Q64378 456 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Ddx54Q8K4L0 874 aaKnown RBP13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Slc26a8Q8R0C3 999 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Bloc1s4Q8VED2 215 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Taf5lQ91WQ5 589 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Syde2E9PUP1 1314 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 AceP09470 1312 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Kcnj4P52189 445 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Ankle2Q6P1H6 964 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Kdm4aQ8BW72 1064 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Gripap1Q8VD04 806 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Col4a1P02463 1669 aa13.58□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Kiaa0232Q80U59 1396 aaKnown RBP13.57□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Nlrp9bQ66X22 1003 aa13.57□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Ripor2Q80U16 1078 aa13.57□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Il1rapl2Q9ERS6 686 aa13.57□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Mcm4P49717 862 aa13.57□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Morc2aQ69ZX6 1030 aa13.57□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Slx1bQ8BX32 270 aa13.57□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Pard3Q99NH2 1333 aa13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Bms1Q6PGF5 1284 aaKnown RBP13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Dhx38Q80X98 1228 aa13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Zkscan1Q8BGS3 561 aaKnown RBP13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Gdpd2Q9ESM6 539 aa13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Neurod6P48986 337 aa13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 EvcP57680 1005 aa13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Ccnl1Q52KE7 532 aaKnown RBP13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 NexnQ7TPW1 607 aa13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 LlphQ9D945 130 aaKnown RBP13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 LratQ9JI60 231 aa13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Rnf123Q5XPI3 1314 aa13.56□□□□□ -0.24
Ddx55-201ENSMUST00000071057 InsrrQ9WTL4 1300 aa13.55□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Hoxa7P02830 229 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Ddx58Q6Q899 926 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Q8C5K5 320 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Sf3a1Q8K4Z5 791 aaKnown RBP13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Bag3Q9JLV1 577 aaKnown RBP13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Rad50P70388 1312 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Map2k1P31938 393 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Zbtb40Q6PCS8 1258 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 AnlnQ8K298 1121 aaKnown RBP13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Cap2Q9CYT6 476 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Ms4a2P20490 235 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Trim52Q8CDV4 233 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 ApobrQ8VBT6 942 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Slx4ipQ9D7Y9 413 aa13.54□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Rasa1E9PYG6 1038 aa13.53□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Vwa3bJ9JI28 736 aa13.53□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Anapc15P60007 132 aa13.53□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Filip1lQ6P6L0 1131 aa13.53□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Bag4Q8CI61 457 aa13.53□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Top1mtQ8R4U6 593 aa13.53□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Ica1lQ3TY65 431 aa13.53□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Pdzrn3Q69ZS0 1063 aa13.53□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Sugp2Q8CH09 1067 aa13.53□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Shank2Q80Z38 1476 aa13.52□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Ppfia1B2RXQ2 1266 aa13.52□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Gse1Q3U3C9 1213 aa13.52□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Gnat3Q3V3I2 354 aa13.52□□□□□ -0.24
Ddx55-201ENSMUST00000071057 Smg7Q5RJH6 1138 aaKnown RBP13.52□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Gimap5Q8BWF2 308 aa13.52□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Akap11E9Q777 1895 aa13.51□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Adam1aQ60813 791 aa13.51□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Tiam2Q6ZPF3 1715 aa13.51□□□□□ -0.25
Ddx55-201ENSMUST00000071057 Zdhhc9P59268 364 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms