RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Cnot6lQ8VEG6 555 aa19.9■□□□□ 0.78
Usp48-201ENSMUST00000055131 Dzip1Q8BMD2 852 aa19.9■□□□□ 0.78
Usp48-201ENSMUST00000055131 Mybbp1aQ7TPV4 1344 aaKnown RBP19.9■□□□□ 0.78
Usp48-201ENSMUST00000055131 Nap1l2P51860 460 aa19.89■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ssrp1Q08943 708 aaKnown RBP19.89■□□□□ 0.78
Usp48-201ENSMUST00000055131 RragbQ6NTA4 374 aa19.89■□□□□ 0.78
Usp48-201ENSMUST00000055131 Naa15Q80UM3 865 aaKnown RBP19.89■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ift74Q8BKE9 600 aa19.89■□□□□ 0.78
Usp48-201ENSMUST00000055131 GlmnQ8BZM1 596 aa19.89■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ptcd1Q8C2E4 695 aaKnown RBP19.89■□□□□ 0.78
Usp48-201ENSMUST00000055131 Zfp42P22227 288 aa19.89■□□□□ 0.77
Usp48-201ENSMUST00000055131 Hs2st1Q8R3H7 356 aa19.89■□□□□ 0.77
Usp48-201ENSMUST00000055131 WtapQ9ER69 396 aa19.89■□□□□ 0.77
Usp48-201ENSMUST00000055131 Zmym3Q9JLM4 1370 aa19.89■□□□□ 0.77
Usp48-201ENSMUST00000055131 Gse1Q3U3C9 1213 aa19.89■□□□□ 0.77
Usp48-201ENSMUST00000055131 Ctnna2Q61301 953 aa19.89■□□□□ 0.77
Usp48-201ENSMUST00000055131 Snx13Q6PHS6 957 aa19.89■□□□□ 0.77
Usp48-201ENSMUST00000055131 Slx4ipQ9D7Y9 413 aa19.89■□□□□ 0.77
Usp48-201ENSMUST00000055131 Hook3Q8BUK6 718 aa19.89■□□□□ 0.77
Usp48-201ENSMUST00000055131 Skor1Q8BX46 964 aa19.89■□□□□ 0.77
Usp48-201ENSMUST00000055131 F2rP30558 430 aa19.88■□□□□ 0.77
Usp48-201ENSMUST00000055131 Usp5P56399 858 aaKnown RBP19.88■□□□□ 0.77
Usp48-201ENSMUST00000055131 RalylQ8BTF8 293 aa19.88■□□□□ 0.77
Usp48-201ENSMUST00000055131 Als2cr12Q8BVM7 383 aa19.88■□□□□ 0.77
Usp48-201ENSMUST00000055131 Efcab2Q9CQ46 164 aa19.88■□□□□ 0.77
Usp48-201ENSMUST00000055131 Pik3c2gO70167 1506 aa19.88■□□□□ 0.77
Usp48-201ENSMUST00000055131 CalcaP70160 136 aa19.88■□□□□ 0.77
Usp48-201ENSMUST00000055131 Znf697Q569E7 569 aa19.88■□□□□ 0.77
Usp48-201ENSMUST00000055131 Smc1aQ9CU62 1233 aaKnown RBP19.88■□□□□ 0.77
Usp48-201ENSMUST00000055131 Cfap53Q9D439 514 aa19.88■□□□□ 0.77
Usp48-201ENSMUST00000055131 Hdhd2Q3UGR5 259 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Slx4Q6P1D7 1565 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Amotl2Q8K371 772 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Prpf40aQ9R1C7 953 aaKnown RBP19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Mapkbp1Q6NS57 1503 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Pdia3P27773 505 aaKnown RBP19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Pdcl2Q78Y63 240 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Kdm3aQ6PCM1 1323 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Tbc1d8bA3KGB4 1114 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Slc1a4O35874 532 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Nucb2P81117 420 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Fam177a1Q8BR63 207 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Smco2Q9DA21 347 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Tmem266Q8BZB3 538 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Syt10Q9R0N4 523 aa19.87■□□□□ 0.77
Usp48-201ENSMUST00000055131 Ano10Q8BH79 659 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Zbtb43Q9DAI4 467 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Gimap5Q8BWF2 308 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Akap2O54931 893 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Sun3Q5SS91 320 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Ift122Q6NWV3 1182 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Atp7aQ64430 1491 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Gapvd1Q6PAR5 1458 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Slc4a4O88343 1079 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Iffo1Q8BXL9 562 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Gpatch8A2A6A1 1505 aa19.86■□□□□ 0.77
Usp48-201ENSMUST00000055131 Pa2g4P50580 394 aaKnown RBP19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 Tmem94Q7TSH8 1360 aa19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 Zc3h12cQ5DTV4 884 aa19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 Liat1Q810M6 228 aa19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 DlatQ8BMF4 642 aa19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 Pkd2l2Q9JLG4 621 aa19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 LifrP42703 1092 aa19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 Atp8b2P98199 1209 aa19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 Cyp4f39Q8BGU0 532 aa19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 Lmod1Q8BVA4 595 aa19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 Hsf2bpQ9D4G2 338 aa19.85■□□□□ 0.77
Usp48-201ENSMUST00000055131 Klhl30Q8C3F7 581 aa19.84■□□□□ 0.77
Usp48-201ENSMUST00000055131 DroshaQ5HZJ0 1373 aaKnown RBP19.84■□□□□ 0.77
Usp48-201ENSMUST00000055131 Frat2Q8K025 231 aa19.84■□□□□ 0.77
Usp48-201ENSMUST00000055131 Fam107bQ3TGF2 131 aa19.84■□□□□ 0.77
Usp48-201ENSMUST00000055131 CenppQ9CZ92 286 aa19.84■□□□□ 0.77
Usp48-201ENSMUST00000055131 Ncoa3O09000 1398 aa19.84■□□□□ 0.77
Usp48-201ENSMUST00000055131 Ranbp6Q8BIV3 1105 aa19.84■□□□□ 0.77
Usp48-201ENSMUST00000055131 Rad50P70388 1312 aa19.84■□□□□ 0.77
Usp48-201ENSMUST00000055131 Catsper2A2ARP9 588 aa19.83■□□□□ 0.77
Usp48-201ENSMUST00000055131 Mrps27Q8BK72 415 aaKnown RBP19.83■□□□□ 0.77
Usp48-201ENSMUST00000055131 Gle1Q8R322 699 aa19.83■□□□□ 0.77
Usp48-201ENSMUST00000055131 Fam160b2Q80YR2 744 aa19.83■□□□□ 0.76
Usp48-201ENSMUST00000055131 Chd1lQ9CXF7 900 aa19.83■□□□□ 0.76
Usp48-201ENSMUST00000055131 Gm7347D3YYI9 267 aa19.83■□□□□ 0.76
Usp48-201ENSMUST00000055131 Speer4aF8VPX6 267 aa19.83■□□□□ 0.76
Usp48-201ENSMUST00000055131 Smarcc1P97496 1104 aa19.83■□□□□ 0.76
Usp48-201ENSMUST00000055131 Pik3ap1Q9EQ32 811 aa19.83■□□□□ 0.76
Usp48-201ENSMUST00000055131 Uchl5Q9WUP7 329 aa19.83■□□□□ 0.76
Usp48-201ENSMUST00000055131 Fermt2Q8CIB5 680 aa19.83■□□□□ 0.76
Usp48-201ENSMUST00000055131 GckrQ91X44 587 aa19.83■□□□□ 0.76
Usp48-201ENSMUST00000055131 Mcm6P97311 821 aa19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Rapgef3Q8VCC8 918 aa19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Mrps25Q9D125 171 aaKnown RBP19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Taf7Q9R1C0 341 aa19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Atp2b3Q0VF55 1220 aa19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Ttc12Q8BW49 704 aa19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Eif4g1Q6NZJ6 1600 aaKnown RBP19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Grm8P47743 908 aa19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Ncf1Q09014 390 aa19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Ift88Q61371 824 aa19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Cdca8Q8BHX3 289 aa19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Brd3Q8K2F0 726 aaKnown RBP19.82■□□□□ 0.76
Usp48-201ENSMUST00000055131 Brd1E9PZ26 1189 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms