RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Mybbp1aQ7TPV4 1344 aaKnown RBP9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Tnnt1O88346 262 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gm12185Q5NCB2 835 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Adora1Q60612 326 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Pde3bQ61409 1100 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 HdgfP51859 237 aaKnown RBP9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Bag4Q8CI61 457 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Rhot2Q8JZN7 620 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Bcl2l12Q9D3J3 255 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gm21663A0A0G2JE01 267 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gm7361D3Z6R1 267 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 5031410I06RikE9Q4E0 267 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gm1979E9QAN3 267 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gm5862K7N5V5 267 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gm10220K7N660 267 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Cnnm1Q0GA42 951 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 DbnlQ62418 436 aa9.67□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Prl3d3A0A0M6L0J6 224 aa9.66□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Hspa2P17156 633 aa9.66□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Mlh1Q9JK91 760 aa9.66□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Map3k13Q1HKZ5 959 aa9.66□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Ifit2Q64112 472 aa9.66□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Speer4bQ9D9F7 267 aa9.66□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 EspnlQ3UYR4 1005 aa9.66□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 GorabQ8BRM2 368 aa9.66□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Slc39a6Q8C145 765 aa9.66□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Zeb2Q9R0G7 1215 aa9.66□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Ets1P27577 440 aa9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 NexnQ7TPW1 607 aa9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Brf1Q8CFK2 676 aa9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 StrbpQ91WM1 672 aaKnown RBP9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Ginm1Q91WR6 327 aa9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 PtmsQ9D0J8 101 aaKnown RBP9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Bag3Q9JLV1 577 aaKnown RBP9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Ubr3Q5U430 1889 aa9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 NmiO35309 314 aa9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Il17raQ60943 864 aa9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Dis3l2Q8CI75 870 aaKnown RBP9.65□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Mctp2Q5RJH2 878 aa9.65□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Rufy3Q9D394 469 aa9.65□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Fbxo3Q9DC63 480 aa9.65□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Znfx1Q8R151 1909 aaKnown RBP9.65□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 ImpactO55091 318 aa9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Sult6b1P0CC03 303 aa9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Rfx1P48377 963 aa9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Tmx3Q8BXZ1 456 aa9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Npc1l1Q6T3U4 1333 aa9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 MccE9PWI3 1003 aa9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Smarce1O54941 411 aaKnown RBP9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Hmgb2P30681 210 aaKnown RBP9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Bcl2l13P59017 434 aa9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Cwc25Q9DBF7 416 aa9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Hdac6Q9Z2V5 1149 aa9.64□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Zfp804bA0A0G2JGH6 1343 aa9.63□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Fkbp5Q64378 456 aa9.63□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Usp44Q8C2S0 711 aa9.63□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Cap2Q9CYT6 476 aa9.63□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Cyp19a1P28649 503 aa9.63□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 EvcP57680 1005 aa9.63□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Atp6v1dP57746 247 aa9.63□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Sik1Q60670 779 aa9.63□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Asap2Q7SIG6 958 aa9.63□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Kcnq5Q9JK45 933 aa9.63□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Rasa1E9PYG6 1038 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Slc4a10Q5DTL9 1118 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Clca2Q8BG22 942 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Edc3Q8K2D3 508 aaKnown RBP9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Top1mtQ8R4U6 593 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 4931408C20RikE9PWP9 1381 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Ints3Q7TPD0 1041 aaKnown RBP9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 4930504O13RikQ8C5Z9 145 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Fam213aQ9CYH2 218 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Myh15E9Q264 1925 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Gm21680A0A0G2JGR8 267 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Eef2kO08796 724 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Amer1Q7TS75 1132 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Pip4k2bQ80XI4 416 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 KinQ8K339 391 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Hmg20bQ9Z104 317 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Itgb4A2A863 1818 aa9.62□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Prr29B1ARI9 187 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Slc4a1P04919 929 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 GpkowQ56A08 488 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Soga3Q6NZL0 945 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Smim5Q8BT42 78 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Mb21d2Q8C525 428 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Dpf1Q9QX66 387 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Ak2Q9WTP6 239 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Kdm3aQ6PCM1 1323 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 AfdnQ9QZQ1 1820 aaKnown RBP9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Plekhf1Q3TB82 279 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Tti2Q8BGV4 512 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Slx4ipQ9D7Y9 413 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Gdpd2Q9ESM6 539 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Foxo4Q9WVH3 505 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Cyp2d10P24456 504 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Nek11Q8C0Q4 628 aa9.61□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Eya2O08575 532 aa9.6□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Slc26a8Q8R0C3 999 aa9.6□□□□□ -0.87
Ccdc60-201ENSMUST00000050178 Aox1O54754 1333 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms