RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Rab3gap1Q80UJ7 981 aa22.65■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Ubxn10Q8BG34 277 aa22.65■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Zfp113Q8C689 439 aa22.65■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Rbm8aQ9CWZ3 174 aa22.65■■□□□ 1.22
Ccdc50-201ENSMUST00000039443 Esyt1Q3U7R1 1092 aaKnown RBP22.64■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 EspnlQ3UYR4 1005 aa22.64■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 EappQ5BU09 281 aa22.64■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Ncoa4Q5U4H9 625 aa22.64■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Bloc1s2Q9CWG9 143 aa22.64■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Ak2Q9WTP6 239 aa22.64■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 RdxP26043 583 aaKnown RBP22.63■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 HellsQ60848 821 aa22.63■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Snx13Q6PHS6 957 aa22.63■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Atf7Q8R0S1 413 aa22.63■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Cep57l1Q8VDS7 400 aa22.63■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Ccdc66Q6NS45 935 aa22.63■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Rhot2Q8JZN7 620 aa22.63■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Tmem119Q8R138 280 aa22.63■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Robo1O89026 1612 aa22.62■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Tmem132eQ6IEE6 982 aa22.62■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Zbtb3Q91X45 518 aa22.62■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Cdca7lQ922M5 438 aa22.62■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Tbc1d8Q9Z1A9 1134 aa22.62■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Flt4P35917 1363 aa22.62■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Tgfb1i1Q62219 461 aa22.62■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Btbd11Q6GQW0 1109 aa22.62■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Sytl4Q9R0Q1 673 aa22.62■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Marf1Q8BJ34 1730 aaKnown RBP22.61■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Zfp142G5E869 1843 aa22.61■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Dixdc1Q80Y83 711 aa22.61■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Zeb2Q9R0G7 1215 aa22.61■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Ubn2Q80WC1 1314 aa22.61■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Kiaa0232Q80U59 1396 aaKnown RBP22.6■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Map3k2Q61083 619 aa22.6■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Cadps2Q8BYR5 1297 aa22.6■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Hmg20bQ9Z104 317 aa22.6■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Cdkn1cP49919 348 aa22.59■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Cnnm3Q32NY4 713 aa22.59■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Abca15E9PWH4 1668 aa22.59■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Tyro3P55144 880 aa22.59■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Pkp1P97350 728 aaKnown RBP22.59■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Zfp251Q6PCX8 632 aa22.59■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Kcnf1Q7TSH7 493 aa22.59■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 MecomP14404 1042 aa22.58■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Fkbp4P30416 458 aa22.58■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 FanccP50652 591 aa22.58■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Tnnt2P50752 301 aa22.58■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Map3k13Q1HKZ5 959 aa22.58■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 R3hcc1Q8BSI6 488 aa22.58■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Gys2Q8VCB3 704 aa22.58■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Irx6Q9ER75 438 aa22.58■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Ybx3Q9JKB3 361 aaKnown RBP22.58■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Krt85Q9Z2T6 507 aa22.58■■□□□ 1.21
Ccdc50-201ENSMUST00000039443 Qtrt2B8ZXI1 415 aa22.57■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Trim30aP15533 496 aa22.57■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Arhgef1Q61210 920 aaKnown RBP22.57■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 TnmdQ9EP64 317 aa22.57■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Babam1Q3UI43 333 aa22.57■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Amotl2Q8K371 772 aa22.57■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 PhaxQ9JJT9 385 aaKnown RBP22.57■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Zbtb22Q9Z0G7 638 aa22.57■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Nfat5Q9WV30 1534 aa22.56■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Fbxo41Q6NS60 873 aa22.56■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Rps6kb1Q8BSK8 525 aa22.56■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Plcd1Q8R3B1 756 aa22.56■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Ndufa8Q9DCJ5 172 aa22.56■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Bag3Q9JLV1 577 aaKnown RBP22.56■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Brpf3B2KF05 1204 aaKnown RBP22.56■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 F2rP30558 430 aa22.56■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 TatQ8QZR1 454 aa22.56■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Mrpl50Q8VDT9 159 aaKnown RBP22.56■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Tbc1d4Q8BYJ6 1307 aa22.55■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Pa2g4P50580 394 aaKnown RBP22.55■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Irf9Q61179 399 aa22.55■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Grm8P47743 908 aa22.55■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 CgnP59242 1191 aa22.55■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Dzip1Q8BMD2 852 aa22.55■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Rbm42Q91V81 474 aaKnown RBP22.55■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Polr3dQ91WD1 398 aa22.55■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Bicc1Q99MQ1 977 aaKnown RBP22.55■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Aox2Q5SGK3 1345 aa22.54■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 GckrQ91X44 587 aa22.54■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Srgap1Q91Z69 1062 aa22.54■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Bcl9lQ67FY2 1494 aa22.53■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Tpd52l1O54818 204 aa22.53■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Kcnh5Q920E3 988 aa22.53■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 RubcnlQ3TD16 648 aa22.53■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Fbxo2Q80UW2 297 aa22.53■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Sp8Q8BMJ8 486 aa22.53■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Siglec1Q62230 1695 aa22.53■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Sass6Q80UK7 654 aa22.52■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Slc26a8Q8R0C3 999 aa22.52■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Slc5a4bQ91ZP4 660 aa22.52■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Col22a1E9Q7P1 1613 aa22.52■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Dync1i1O88485 628 aa22.52■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Cdk4P30285 303 aa22.52■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Znf526Q8BI66 675 aa22.52■■□□□ 1.2
Ccdc50-201ENSMUST00000039443 Fbxl16A2RT62 479 aa22.51■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 ZwintQ9CQU5 252 aa22.51■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Ugt1a5B2RT14 529 aa22.5■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms