RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Ctdnep1Q3TP92 244 aa21.96■■□□□ 1.11
Ccdc3-201ENSMUST00000027988 Bcl9Q9D219 1425 aa21.96■■□□□ 1.11
Ccdc3-201ENSMUST00000027988 Tjp1P39447 1745 aaKnown RBP21.96■■□□□ 1.11
Ccdc3-201ENSMUST00000027988 Pcdh10E9PXQ7 1057 aa21.95■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Cfap73J3QPZ5 306 aa21.95■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Irf5P56477 497 aa21.95■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 DbnlQ62418 436 aa21.95■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Fam50bQ9WTJ8 334 aa21.95■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Gse1Q3U3C9 1213 aa21.95■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Zfp113Q8C689 439 aa21.95■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Snx13Q6PHS6 957 aa21.94■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Cchcr1Q8K2I2 770 aa21.94■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Med4Q9CQA5 270 aa21.94■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Phkg2Q9DB30 406 aa21.94■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Utp3Q9JI13 469 aaKnown RBP21.94■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 1700006A11RikB9EHI3 544 aa21.94■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 GpkowQ56A08 488 aa21.94■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 MecomP14404 1042 aa21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Neurod6P48986 337 aa21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Larp1Q6ZQ58 1072 aaKnown RBP21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Me3Q8BMF3 604 aa21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Nup88Q8CEC0 753 aaKnown RBP21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 MypnQ5DTJ9 1315 aa21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Ndufa8Q9DCJ5 172 aa21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Col4a1P02463 1669 aa21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 FanccP50652 591 aa21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Leo1Q5XJE5 667 aa21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 StrbpQ91WM1 672 aaKnown RBP21.93■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Lnx1O70263 728 aa21.92■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Cnnm3Q32NY4 713 aa21.92■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Vps54Q5SPW0 977 aa21.92■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Slain2Q8CI08 581 aa21.92■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Brpf3B2KF05 1204 aaKnown RBP21.92■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Evi5lH3BKQ3 813 aa21.92■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Esyt1Q3U7R1 1092 aaKnown RBP21.92■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Rps6kb1Q8BSK8 525 aa21.92■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Atf7Q8R0S1 413 aa21.92■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Pus3Q9JI38 481 aa21.92■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 CrklP47941 303 aa21.91■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 CgnP59242 1191 aa21.91■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Tex2Q6ZPJ0 1128 aaKnown RBP21.91■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Dis3l2Q8CI75 870 aaKnown RBP21.91■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Fam84aQ9D650 292 aa21.91■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 InsrrQ9WTL4 1300 aa21.91■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Zranb3Q6NZP1 1069 aa21.91■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Chmp7Q8R1T1 451 aa21.91■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Dixdc1Q80Y83 711 aa21.9■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Add3Q9QYB5 706 aaKnown RBP21.9■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Fam184aE9PW83 1143 aa21.9■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Ripor2Q80U16 1078 aa21.9■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Nfe2l3Q9WTM4 660 aa21.9■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Ppfia3P60469 1194 aa21.89■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 Asic4Q7TNS7 539 aa21.89■■□□□ 1.1
Ccdc3-201ENSMUST00000027988 NaspQ99MD9 773 aaKnown RBP21.89■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Igbp1bQ9QZ29 343 aa21.89■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Mybbp1aQ7TPV4 1344 aaKnown RBP21.89■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Ccdc173A0JLY1 547 aa21.88■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Rbbp8nlA2ABX0 614 aa21.88■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 NpeppsQ11011 920 aa21.88■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Mmel1Q9JLI3 765 aa21.88■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Gm21698A0A087WQP8 267 aa21.88■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Gm21671G3UY31 267 aa21.88■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Ddx46Q569Z5 1032 aaKnown RBP21.88■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Kcnf1Q7TSH7 493 aa21.88■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Tns2Q8CGB6 1400 aa21.88■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Polr3gQ6NXY9 223 aa21.87■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 TkfcQ8VC30 578 aa21.87■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Bloc1s2Q9CWG9 143 aa21.87■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 RubcnlQ3TD16 648 aa21.87■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Hvcn1Q3U2S8 269 aa21.87■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Ubash3aQ3V3E1 624 aa21.87■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Farp2Q91VS8 1065 aa21.87■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Usp25P57080 1055 aa21.86■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Tbc1d31Q6NXY1 996 aa21.86■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 FosbP13346 338 aa21.85■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Lins1Q3U1D0 764 aa21.85■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Soga3Q6NZL0 945 aa21.85■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Kank4Q6P9J5 1016 aa21.85■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 TefQ9JLC6 301 aa21.85■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Kansl3A2RSY1 903 aaKnown RBP21.85■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 SrrtQ99MR6 875 aaKnown RBP21.85■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Psma5Q9Z2U1 241 aaKnown RBP21.85■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Nap1l3Q794H2 544 aa21.84■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Inpp5bQ8K337 993 aa21.84■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Aox1O54754 1333 aa21.84■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Cyp2d10P24456 504 aa21.84■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Pde3bQ61409 1100 aa21.84■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 TrhQ62361 256 aa21.84■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Tnks1bp1P58871 1720 aa21.84■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Ncbp1Q3UYV9 790 aaKnown RBP21.83■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Lrrfip2Q91WK0 415 aa21.83■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Shank2Q80Z38 1476 aa21.83■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 AppP12023 770 aa21.83■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Ccdc129Q14B48 1034 aa21.83■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Ifit1Q64282 463 aa21.83■■□□□ 1.09
Ccdc3-201ENSMUST00000027988 Ptgs1P22437 602 aa21.83■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Q8C5K5 320 aa21.83■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Serpina10Q8R121 448 aa21.83■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Ercc3P49135 783 aa21.82■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 NcapgE9PWG6 1004 aa21.82■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms