RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Kcnh4A2A5F7 1018 aa24.28■■□□□ 1.48
Ctdsp1-201ENSMUST00000027367 Pde3bQ61409 1100 aa24.28■■□□□ 1.48
Ctdsp1-201ENSMUST00000027367 Cyb5rlB1AS42 316 aa24.27■■□□□ 1.48
Ctdsp1-201ENSMUST00000027367 AK157302I3ITR1 129 aa24.27■■□□□ 1.48
Ctdsp1-201ENSMUST00000027367 EvcP57680 1005 aa24.27■■□□□ 1.48
Ctdsp1-201ENSMUST00000027367 Top1mtQ8R4U6 593 aa24.27■■□□□ 1.48
Ctdsp1-201ENSMUST00000027367 Isca1Q9D924 129 aa24.27■■□□□ 1.48
Ctdsp1-201ENSMUST00000027367 Cwc25Q9DBF7 416 aa24.27■■□□□ 1.48
Ctdsp1-201ENSMUST00000027367 Stard3nlQ9DCI3 235 aa24.27■■□□□ 1.48
Ctdsp1-201ENSMUST00000027367 Ythdc1E9Q5K9 736 aaKnown RBP24.26■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Neurod6P48986 337 aa24.26■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Mylk2Q8VCR8 613 aa24.26■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 LratQ9JI60 231 aa24.26■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Ybx3Q9JKB3 361 aaKnown RBP24.26■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Myd88P22366 296 aa24.25■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 AppP12023 770 aa24.25■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Znf526Q8BI66 675 aa24.25■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Pdzrn3Q69ZS0 1063 aa24.25■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Dis3l2Q8CI75 870 aaKnown RBP24.25■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Nav1Q8CH77 1875 aa24.24■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Gys2Q8VCB3 704 aa24.24■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 DbnlQ62418 436 aa24.24■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Gdpd2Q9ESM6 539 aa24.24■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Mrc1Q61830 1456 aa24.24■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Slx4ipQ9D7Y9 413 aa24.23■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Filip1lQ6P6L0 1131 aa24.23■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Mknk2Q8CDB0 459 aa24.23■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Dnajc14Q921R4 703 aa24.23■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Ankib1Q6ZPS6 1085 aa24.22■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Pdcl2Q78Y63 240 aa24.22■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Bag4Q8CI61 457 aa24.22■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Fbxo2Q80UW2 297 aa24.22■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Lrrc59Q922Q8 307 aaKnown RBP24.22■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Ehd4Q9EQP2 541 aa24.22■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Mst1rQ62190 1378 aa24.22■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Hdac6Q9Z2V5 1149 aa24.21■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Sos2Q02384 1333 aa24.21■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Tnrc6cQ3UHC0 1690 aaKnown RBP24.21■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Utp18Q5SSI6 552 aaKnown RBP24.21■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Sik1Q60670 779 aa24.21■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Ifit2Q64112 472 aa24.21■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Ddx11Q6AXC6 880 aa24.21■■□□□ 1.47
Ctdsp1-201ENSMUST00000027367 Prl3d3A0A0M6L0J6 224 aa24.2■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Rasa1E9PYG6 1038 aa24.2■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 KinQ8K339 391 aa24.2■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Sipa1l3G3X9J0 1776 aa24.2■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Zdhhc9P59268 364 aa24.2■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Cers3Q1A3B0 383 aa24.2■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Bcl2l12Q9D3J3 255 aa24.2■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Ccdc7Q9D541 371 aa24.2■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Tbc1d4Q8BYJ6 1307 aa24.19■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Smarce1O54941 411 aaKnown RBP24.19■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Sult6b1P0CC03 303 aa24.19■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 DekQ7TNV0 380 aaKnown RBP24.19■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 AbraQ8BUZ1 375 aa24.19■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Add2Q9QYB8 725 aa24.19■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Rhot2Q8JZN7 620 aa24.19■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Fam213aQ9CYH2 218 aa24.19■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Atp6v1dP57746 247 aa24.18■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Gjb2Q00977 226 aa24.18■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Adam1aQ60813 791 aa24.18■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Ints3Q7TPD0 1041 aaKnown RBP24.18■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 AtrnQ9WU60 1428 aa24.18■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Ppp4r3aQ6P2K6 820 aa24.17■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Dcaf5Q80T85 946 aa24.17■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Gigyf1Q99MR1 1044 aaKnown RBP24.17■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Bcl11bQ99PV8 884 aa24.17■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Atg9aQ68FE2 551 aa24.17■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Rrs1Q9CYH6 365 aaKnown RBP24.17■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Ush1cQ9ES64 910 aa24.17■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Mdm2P23804 489 aa24.16■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Nlrp1aQ2LKU9 1182 aa24.16■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Ttc19Q8CC21 365 aa24.16■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Smc4Q8CG47 1286 aa24.16■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Chmp3Q9CQ10 224 aa24.16■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Prl3d2F6R3P9 224 aa24.15■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Exoc5Q3TPX4 708 aa24.15■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Nip7Q9CXK8 180 aaKnown RBP24.15■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Rbbp8nlA2ABX0 614 aa24.14■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Tmc2Q8R4P4 888 aa24.14■■□□□ 1.46
Ctdsp1-201ENSMUST00000027367 Rbm8a2A0A0N4SUH6 174 aa24.14■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Strn4P58404 760 aa24.14■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Igflr1Q3U4N7 345 aa24.14■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Vps54Q5SPW0 977 aa24.14■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Rbm8aQ9CWZ3 174 aa24.14■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Ak2Q9WTP6 239 aa24.14■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Gnl3lQ6PGG6 577 aaKnown RBP24.13■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Ginm1Q91WR6 327 aa24.13■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Mast2Q60592 1734 aa24.13■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Ubxn10Q8BG34 277 aa24.13■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Qtrt2B8ZXI1 415 aa24.13■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 MecomP14404 1042 aa24.13■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 NfkbibQ60778 359 aa24.12■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Ric1Q69ZJ7 1422 aa24.12■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Elmsan1E9Q2I4 1089 aaKnown RBP24.12■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 St18Q80TY4 1045 aa24.12■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 PtmsQ9D0J8 101 aaKnown RBP24.12■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Tti2Q8BGV4 512 aa24.11■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Timm10P62073 90 aa24.11■■□□□ 1.45
Ctdsp1-201ENSMUST00000027367 Ddx19aQ61655 478 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms