RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	SLC41A3	Q96GZ6	507 aa		15.7	■□□□□ 0.1
PHGDH-223	ENST00000641597	SECISBP2	Q96T21	854 aa	Known RBP	15.7	■□□□□ 0.1
PHGDH-223	ENST00000641597	TIMM29	Q9BSF4	260 aa		15.7	■□□□□ 0.1
PHGDH-223	ENST00000641597	PRRG3	Q9BZD7	231 aa		15.7	■□□□□ 0.1
PHGDH-223	ENST00000641597	TRIM45	Q9H8W5	580 aa	Predicted RBP	15.7	■□□□□ 0.1
PHGDH-223	ENST00000641597	FGF20	Q9NP95	211 aa	Predicted RBP	15.7	■□□□□ 0.1
PHGDH-223	ENST00000641597	PRKAG2	Q9UGJ0	569 aa		15.7	■□□□□ 0.1
PHGDH-223	ENST00000641597	NUFIP1	Q9UHK0	495 aa	Known RBP	15.7	■□□□□ 0.1
PHGDH-223	ENST00000641597	KDM4E	B2RXH2	506 aa	Predicted RBP	15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	C5orf67	F2Z3F1	127 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	EIF2S1	P05198	315 aa	Known RBP	15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	ZGLP1	P0C6A0	271 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	GSTM3	P21266	225 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	ATP6V1E1	P36543	226 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	FXYD6P3	P58550	94 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	ST3GAL3	Q11203	375 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	TPBG	Q13641	420 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	TBRG1	Q3YBR2	411 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	MFSD12	Q6NUT3	480 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	FBXO42	Q6P3S6	717 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	PLBD1	Q6P4A8	553 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	ZC3H14	Q6PJT7	736 aa	Known RBP	15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	PAMR1	Q6UXH9	720 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	RASSF6	Q6ZTQ3	369 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	IL17RC	Q8NAC3	791 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	MFSD9	Q8NBP5	474 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	OR5T3	Q8NGG3	340 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	OR1E3	Q8WZA6	343 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	WDFY2	Q96P53	400 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	SLC38A2	Q96QD8	506 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	ACTRT3	Q9BYD9	372 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	ADAP2	Q9NPF8	381 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	KCNE5	Q9UJ90	142 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	ZNF221	Q9UK13	617 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	ATG2A	Q2TAZ0	1938 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	BRWD1	Q9NSI6	2320 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	TMEM129	A0AVI4	362 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597		K7EQS6	105 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	CACNB4	O00305	520 aa	Predicted RBP	15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	SLC30A4	O14863	429 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	KRT8	P05787	483 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	COL9A1	P20849	921 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	PBX2	P40425	430 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	KIR2DL3	P43628	341 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	ADPRH	P54922	357 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	RPS21	P63220	83 aa	Known RBP	15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	FAM27D1	Q5T7N8	215 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	CNIH2	Q6PI25	160 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	MTSS1L	Q765P7	747 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	RAB43	Q86YS6	212 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	POGLUT1	Q8NBL1	392 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	TMEM52	Q8NDY8	209 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	NECTIN4	Q96NY8	510 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	TTTY10	Q9BZA0	68 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	MCOLN1	Q9GZU1	580 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	PPIL3	Q9H2H8	161 aa	Known RBP	15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	PCDHGB2	Q9Y5G2	931 aa		15.69	■□□□□ 0.1
PHGDH-223	ENST00000641597	POLR1C	O15160	346 aa	Predicted RBP	15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	SDHB	P21912	280 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	HTR2A	P28223	471 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	CMPK1	P30085	196 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	GCGR	P47871	477 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	FAM214A	Q32MH5	1076 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	PDZK1	Q5T2W1	519 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	DDI2	Q5TDH0	399 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	ENPP7	Q6UWV6	458 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	IL20RB	Q6UXL0	311 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	ZNF620	Q6ZNG0	422 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	MRGPRE	Q86SM8	312 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	NRROS	Q86YC3	692 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	MARCH9	Q86YJ5	346 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	C7orf57	Q8NEG2	295 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	MYADM	Q96S97	322 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	TMEM168	Q9H0V1	697 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	RANGRF	Q9HD47	186 aa	Predicted RBP	15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	CBLC	Q9ULV8	474 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	ZNF443	Q9Y2A4	671 aa	Predicted RBP	15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	WDR45	Q9Y484	360 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	PRSS38	A1L453	326 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	CPN2	P22792	545 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	TMEM196	Q5HYL7	178 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	C9orf50	Q5SZB4	431 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	FIGNL1	Q6PIW4	674 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	YAF2	Q8IY57	180 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	C7orf61	Q8IZ16	206 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	UBASH3B	Q8TF42	649 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	ACOT11	Q8WXI4	607 aa	Predicted RBP	15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	STARD5	Q9NSY2	213 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	FBXL4	Q9UKA2	621 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	SNX7	Q9UNH6	387 aa		15.68	■□□□□ 0.1
PHGDH-223	ENST00000641597	GSAP	A4D1B5	854 aa		15.67	■□□□□ 0.1
PHGDH-223	ENST00000641597		B4DXG7	233 aa		15.67	■□□□□ 0.1
PHGDH-223	ENST00000641597	COQ9	O75208	318 aa		15.67	■□□□□ 0.1
PHGDH-223	ENST00000641597	REM1	O75628	298 aa		15.67	■□□□□ 0.1
PHGDH-223	ENST00000641597	APOD	P05090	189 aa		15.67	■□□□□ 0.1
PHGDH-223	ENST00000641597	CLU	P10909	449 aa		15.67	■□□□□ 0.1
PHGDH-223	ENST00000641597	MAK	P20794	623 aa		15.67	■□□□□ 0.1
PHGDH-223	ENST00000641597	ZNF136	P52737	540 aa		15.67	■□□□□ 0.1
PHGDH-223	ENST00000641597	SCN1B	Q07699	218 aa		15.67	■□□□□ 0.1
PHGDH-223	ENST00000641597	KRR1	Q13601	381 aa	Known RBP	15.67	■□□□□ 0.1

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