RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 COMTD1Q86VU5 262 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 LACC1Q8IV20 430 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 PEX5LQ8IYB4 626 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 HS3ST5Q8IZT8 346 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 MORN4Q8NDC4 146 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 OR4N2Q8NGD1 307 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 OR4D11Q8NGI4 311 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 MAGEE2Q8TD90 523 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-221ENST00000641573 METTL21AQ8WXB1 218 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 LIN37Q96GY3 246 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-221ENST00000641573 SLC46A1Q96NT5 459 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 SPSB2Q99619 263 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 PIP5K1AQ99755 562 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 NUDT9Q9BW91 350 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 ULBP3Q9BZM4 244 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 AKIRIN1Q9H9L7 192 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-221ENST00000641573 Q9N2J8 555 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 C3orf18Q9UK00 162 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 SLC13A4Q9UKG4 626 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 RAB26Q9ULW5 256 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 ZNF232Q9UNY5 417 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 CFL2Q9Y281 166 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 ZNF443Q9Y2A4 671 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-221ENST00000641573 LRCH1Q9Y2L9 728 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 IFT52Q9Y366 437 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 TESMINQ9Y4I5 508 aa12.13□□□□□ -0.47
PHGDH-221ENST00000641573 AGAP5A6NIR3 686 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 J3KTA2 159 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 M0R3H8 397 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 TNFRSF11BO00300 401 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 ADAMDEC1O15204 470 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 HPRP00739 348 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 DBIP07108 87 aaKnown RBP12.12□□□□□ -0.47
PHGDH-221ENST00000641573 GUSBP08236 651 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 CT45A8P0DMV1 189 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 CT45A9P0DMV2 189 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 RPS4Y1P22090 263 aaKnown RBP12.12□□□□□ -0.47
PHGDH-221ENST00000641573 SLC5A2P31639 672 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 RFX3P48380 749 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 ALDH3A2P51648 485 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 ARHGDIAP52565 204 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 SPIBQ01892 262 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 LARS2Q15031 903 aaKnown RBP12.12□□□□□ -0.47
PHGDH-221ENST00000641573 CT45A2Q5DJT8 189 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 COLEC12Q5KU26 742 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 C6orf52Q5T4I8 152 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 DEF8Q6ZN54 512 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 ZAR1Q86SH2 424 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 CYP4Z1Q86W10 505 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 RBM45Q8IUH3 476 aaKnown RBP12.12□□□□□ -0.47
PHGDH-221ENST00000641573 GALNT6Q8NCL4 622 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 SNRNP27Q8WVK2 155 aaKnown RBP12.12□□□□□ -0.47
PHGDH-221ENST00000641573 PMM1Q92871 262 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 NRBF2Q96F24 287 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 DEPDC7Q96QD5 511 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 TAAR9Q96RI9 348 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 EPYCQ99645 322 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 BARD1Q99728 777 aaKnown RBP12.12□□□□□ -0.47
PHGDH-221ENST00000641573 ARHGDIGQ99819 225 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 WFDC6Q9BQY6 131 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 CRB3Q9BUF7 120 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 OSBPL11Q9BXB4 747 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 OSBPL10Q9BXB5 764 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 GABARAPL1Q9H0R8 117 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 Q9H521 79 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 WDR54Q9H977 334 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 SMURF2Q9HAU4 748 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 USE1Q9NZ43 259 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 PISDQ9UG56 409 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 SLC9A8Q9Y2E8 581 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 GPR55Q9Y2T6 319 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-221ENST00000641573 B3GALT1Q9Y5Z6 326 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 AP4B1Q9Y6B7 739 aa12.12□□□□□ -0.47
PHGDH-221ENST00000641573 USP9XQ93008 2570 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-221ENST00000641573 FER1L5A0AVI2 2057 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 CCDC187A0A096LP49 1063 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 NPIPA5A0A0B4J1W7 369 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 IGHV3-20A0A0C4DH32 117 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 CENPVL1A0A0U1RR11 272 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 PMS2P1A4D2B8 440 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 C9J4A7 227 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 NPIPA7E9PJI5 369 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 DLGAP1O14490 977 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 DENRO43583 198 aaKnown RBP12.11□□□□□ -0.47
PHGDH-221ENST00000641573 DXOO77932 396 aaKnown RBP12.11□□□□□ -0.47
PHGDH-221ENST00000641573 IGKV1D-16P01601 117 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 ALPLP05186 524 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 THBS1P07996 1170 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 CYC1P08574 325 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 JMJD7P0C870 316 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 NPIPA8P0DM63 369 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 PRKACGP22612 351 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 PIGAP37287 484 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 PPICP45877 212 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 CDH12P55289 794 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 NNATQ16517 81 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 MAPK14Q16539 360 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 FLYWCH1Q4VC44 716 aa12.11□□□□□ -0.47
PHGDH-221ENST00000641573 LIN52Q52LA3 116 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms