RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 EGFL7Q9UHF1 273 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 MKLN1Q9UL63 735 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 ABCG2Q9UNQ0 655 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 PCDHGB7Q9Y5F8 929 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 CROCCQ5TZA2 2017 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 SCN2AQ99250 2005 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 OR5H15A6NDH6 313 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 PRAMEF25A6NGN4 478 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 GSC2O15499 205 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 OR6B1O95007 311 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 ZNF682O95780 498 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 NUDT7P0C024 238 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 BMP2P12643 396 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 MAN2A2P49641 1150 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 FBXW4P57775 412 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 KCNJ2P63252 427 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 FLOT2Q14254 428 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 OR1C1Q15619 314 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 TBR1Q16650 682 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 MTX3Q5HYI7 312 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 ZNF311Q5JNZ3 666 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 RPS26P11Q5JNZ5 115 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 SLC22A10Q63ZE4 541 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 GLYATQ6IB77 296 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 HEPHL1Q6MZM0 1159 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 H3F3CQ6NXT2 135 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 C8orf82Q6P1X6 216 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 C16orf47Q6ZP98 133 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 EIF3MQ7L2H7 374 aaKnown RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 MISPQ8IVT2 679 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 GOLM1Q8NBJ4 401 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 TMEM178AQ8NBL3 297 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 OR52P1PQ8NH57 321 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 PROX1Q92786 737 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 EXTL1Q92935 676 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 SLC7A6OSQ96CW6 309 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 RSRC1Q96IZ7 334 aaKnown RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 ZNF583Q96ND8 569 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 SECISBP2Q96T21 854 aaKnown RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 TREX2Q9BQ50 279 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 ZNF350Q9GZX5 532 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 CNIH4Q9P003 139 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 PACSIN3Q9UKS6 424 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 BAG5Q9UL15 447 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 SAMD4AQ9UPU9 718 aaKnown RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 PCDHGA9Q9Y5G4 932 aaKnown RBP11.93□□□□□ -0.5
PHGDH-218ENST00000641491 SPTA1P02549 2419 aa11.93□□□□□ -0.5
PHGDH-218ENST00000641491 H0YHG0 523 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 SUV39H1O43463 412 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 NDUFB5O43674 189 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 SCO2O43819 266 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 KIAA0513O60268 411 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 DPM1O60762 260 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 ICOSLGO75144 302 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 SLC25A12O75746 678 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 CYP7B1O75881 506 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 PGM3O95394 542 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 WDPCPO95876 746 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 F10P00742 488 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 CHRM4P08173 479 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 TFPTP0C1Z6 253 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 SFTPCP11686 197 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 CYP4B1P13584 511 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 ETS2P15036 469 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 IFNA8P32881 189 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 EVI2BP34910 448 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 SOX18P35713 384 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 CCR4P51679 360 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 MVDP53602 400 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 ATP12AP54707 1039 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 RHDQ02161 417 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 CHRNEQ04844 493 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 NTRK2Q16620 822 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 FKBP9P1Q75LS8 142 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 CALHM3Q86XJ0 350 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 OR10G3Q8NGC4 313 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 C9orf43Q8TAL5 461 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-218ENST00000641491 PHOSPHO1Q8TCT1 267 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 HOXB13Q92826 284 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-218ENST00000641491 ASB9Q96DX5 294 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 TPD52L3Q96J77 140 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 JSRP1Q96MG2 331 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-218ENST00000641491 DOHHQ9BU89 302 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 OSBPL11Q9BXB4 747 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 RNF32Q9H0A6 362 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 SELENONQ9NZV5 590 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 PPP4R1LQ9P1A2 415 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 B4GALT7Q9UBV7 327 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 SLC35A3Q9Y2D2 325 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 SLC9A8Q9Y2E8 581 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 KLF13Q9Y2Y9 288 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-218ENST00000641491 PCDHGA10Q9Y5H3 936 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 KCNE3Q9Y6H6 103 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 KALRNO60229 2985 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 PTPRQQ9UMZ3 2332 aa11.92□□□□□ -0.5
PHGDH-218ENST00000641491 TRAV17A0A0B4J275 112 aa11.91□□□□□ -0.5
PHGDH-218ENST00000641491 KLRC4-KLRK1H3BQV0 150 aa11.91□□□□□ -0.5
PHGDH-218ENST00000641491 ARPC2O15144 300 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms