RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 IL33O95760 270 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 EPPINO95925 133 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 ALPLP05186 524 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 FOLR3P41439 243 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 PPP2R2BQ00005 443 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 SPIBQ01892 262 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 ZNF141Q15928 474 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 RFX4Q33E94 735 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 FAAH2Q6GMR7 532 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 ZNF836Q6ZNA1 936 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 STK32CQ86UX6 486 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 TMPRSS12Q86WS5 348 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 VRK2Q86Y07 508 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 GALNT4Q8N4A0 578 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 BCORP1Q8N888 145 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 ZNF321PQ8N8H1 164 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 ZSCAN1Q8NBB4 408 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 APCDD1LQ8NCL9 501 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 NUBPLQ8TB37 319 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 RNF31Q96EP0 1072 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 SLC29A1Q99808 456 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 WDR77Q9BQA1 342 aaPredicted RBP14.19□□□□□ -0.14
CLN6-219ENST00000637329 RSPO3Q9BXY4 272 aaPredicted RBP14.19□□□□□ -0.14
CLN6-219ENST00000637329 HOXD1Q9GZZ0 328 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 RYDENQ9NUL5 291 aaKnown RBP14.19□□□□□ -0.14
CLN6-219ENST00000637329 SMPD3Q9NY59 655 aaPredicted RBP14.19□□□□□ -0.14
CLN6-219ENST00000637329 PADI1Q9ULC6 663 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 PTRH2Q9Y3E5 179 aaKnown RBP14.19□□□□□ -0.14
CLN6-219ENST00000637329 CEP295Q9C0D2 2601 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 SCN2AQ99250 2005 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 A0A1W2PNU3 283 aaPredicted RBP14.18□□□□□ -0.14
CLN6-219ENST00000637329 CDHR4A6H8M9 788 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 PDLIM1O00151 329 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 TNFRSF11BO00300 401 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 TM4SF5O14894 197 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 FMO6PO60774 539 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 DIRAS1O95057 198 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 IGKV1D-16P01601 117 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 UMODP07911 640 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 CEACAM1P13688 526 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 UQCRBP14927 111 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 LIMS1P48059 325 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 HMGA2P52926 109 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 CLDN6P56747 220 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 RGS8P57771 180 aaPredicted RBP14.18□□□□□ -0.14
CLN6-219ENST00000637329 SLC26A5P58743 744 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 C3orf38Q5JPI3 329 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 COLEC12Q5KU26 742 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 FAM199XQ6PEV8 388 aaPredicted RBP14.18□□□□□ -0.14
CLN6-219ENST00000637329 HSDL2Q6YN16 418 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 COMTD1Q86VU5 262 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 GRAMD2AQ8IUY3 354 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 OFCC1Q8IZS5 231 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 SLC34A3Q8N130 599 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 ZNF527Q8NB42 609 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 PIK3C3Q8NEB9 887 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 OR4C15Q8NGM1 316 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 VANGL1Q8TAA9 524 aaPredicted RBP14.18□□□□□ -0.14
CLN6-219ENST00000637329 PHF10Q8WUB8 498 aaKnown RBP14.18□□□□□ -0.14
CLN6-219ENST00000637329 TP53INP1Q96A56 240 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 NACC2Q96BF6 587 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 NAF1Q96HR8 494 aaKnown RBP14.18□□□□□ -0.14
CLN6-219ENST00000637329 GAL3ST4Q96RP7 486 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 ZNF700Q9H0M5 742 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 NXF5Q9H1B4 397 aaKnown RBP14.18□□□□□ -0.14
CLN6-219ENST00000637329 ANKRD19PQ9H560 264 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 AKIRIN1Q9H9L7 192 aaPredicted RBP14.18□□□□□ -0.14
CLN6-219ENST00000637329 TESMINQ9Y4I5 508 aa14.18□□□□□ -0.14
CLN6-219ENST00000637329 SETXQ7Z333 2677 aaKnown RBP14.17□□□□□ -0.14
CLN6-219ENST00000637329 CENPVL1A0A0U1RR11 272 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 PMS2P1A4D2B8 440 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 C21orf140B9A014 251 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 M0R3H8 397 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 PEX12O00623 359 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 GADD45GO95257 159 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 CD82P27701 267 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 IFNA8P32881 189 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 KRT20P35900 424 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 IST1P53990 364 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 ATP12AP54707 1039 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 CDH12P55289 794 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 RNF4P78317 190 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 FOXC1Q12948 553 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 NNATQ16517 81 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 MAPK14Q16539 360 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 OTUD3Q5T2D3 398 aaPredicted RBP14.17□□□□□ -0.14
CLN6-219ENST00000637329 MRPL2Q5T653 305 aaKnown RBP14.17□□□□□ -0.14
CLN6-219ENST00000637329 TCTN3Q6NUS6 607 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 DEF8Q6ZN54 512 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 TMEM179BQ7Z7N9 219 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 RANBP3LQ86VV4 465 aaPredicted RBP14.17□□□□□ -0.14
CLN6-219ENST00000637329 TAGAPQ8N103 731 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 OR4N2Q8NGD1 307 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 OR4D11Q8NGI4 311 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 OR6T1Q8NGN1 323 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 DIO2Q92813 273 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 ZG16BQ96DA0 208 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.17□□□□□ -0.14
CLN6-219ENST00000637329 FBXO34Q9NWN3 711 aa14.17□□□□□ -0.14
CLN6-219ENST00000637329 TESQ9UGI8 421 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms