RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 GTPBP2Q9BX10 602 aaKnown RBP3.74□□□□□ -1.81
SCN1A-214ENST00000637038 C1QTNF7Q9BXJ2 289 aa3.74□□□□□ -1.81
SCN1A-214ENST00000637038 DPAGT1Q9H3H5 408 aa3.74□□□□□ -1.81
SCN1A-214ENST00000637038 RNF167Q9H6Y7 350 aa3.74□□□□□ -1.81
SCN1A-214ENST00000637038 SLC35C2Q9NQQ7 365 aa3.74□□□□□ -1.81
SCN1A-214ENST00000637038 TAAR2Q9P1P5 351 aa3.74□□□□□ -1.81
SCN1A-214ENST00000637038 HCSTQ9UBK5 93 aa3.74□□□□□ -1.81
SCN1A-214ENST00000637038 NCKAP1Q9Y2A7 1128 aa3.74□□□□□ -1.81
SCN1A-214ENST00000637038 HEBP2Q9Y5Z4 205 aa3.74□□□□□ -1.81
SCN1A-214ENST00000637038 DSPPQ9NZW4 1301 aa3.74□□□□□ -1.81
SCN1A-214ENST00000637038 CEP290O15078 2479 aa3.74□□□□□ -1.81
SCN1A-214ENST00000637038 CFAP54Q96N23 3096 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TRAV6A0A075B6T7 132 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 URADA6NGE7 173 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PGRMC2O15173 223 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 YY2O15391 372 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ERAL1O75616 437 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RCBTB2O95199 551 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 NFATC1O95644 943 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 C1QBP02746 253 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 EPHX1P07099 455 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 GRK5P34947 590 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ARFIP1P53367 373 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MVDP53602 400 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 AP3S2P59780 193 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RPS7P62081 194 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 GAS6Q14393 721 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 NFE2L1Q14494 772 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 OR4C11Q6IEV9 310 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TCTN3Q6NUS6 607 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM25Q86YD3 366 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SLC37A3Q8NCC5 494 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TMIEQ8NEW7 156 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 OR2T33Q8NG76 320 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ZC3HAV1LQ96H79 300 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TREX2Q9BQ50 279 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ACAT2Q9BWD1 397 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ACTR6Q9GZN1 396 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 C11orf54Q9H0W9 315 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FBRSQ9HAH7 460 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PHPT1Q9NRX4 125 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 C14orf105Q9NVL8 296 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MRPS18AQ9NVS2 196 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TBC1D24Q9ULP9 559 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 LSM2Q9Y333 95 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 GPSM3Q9Y4H4 160 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 V9GYH0 126 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RIIAD1A6NNX1 92 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 B4DXG7 233 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 NRG2O14511 850 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PLD2O14939 933 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CCL16O15467 120 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 HOXC11O43248 304 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SCO2O43819 266 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CPNE3O75131 537 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 GCM2O75603 506 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 OR2B3O76000 313 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 OR5F1O95221 314 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MT-ND5P03915 603 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ITGB2P05107 769 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 GAAP10253 952 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ALPPL2P10696 532 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ADH5P11766 374 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RAC2P15153 192 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PDHA2P29803 388 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CMPK1P30085 196 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MTNR1BP49286 362 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RPS26P62854 115 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ACTC1P68032 377 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ACTA1P68133 377 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FOXK1P85037 733 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MEF2AQ02078 507 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 LGALS3BPQ08380 585 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 POU4F2Q12837 409 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 EFR3AQ14156 821 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SEC23BQ15437 767 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 DUSP7Q16829 419 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 BTBD16Q32M84 506 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF658BQ4V348 819 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 LY6G5CQ5SRR4 150 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 C6orf132Q5T0Z8 1188 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FHL5Q5TD97 284 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF770Q6IQ21 691 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 C1orf94Q6P1W5 598 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 GAREM2Q75VX8 874 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TMCO2Q7Z6W1 182 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM150AQ86TG1 271 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TPRA1Q86W33 373 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 LRRC28Q86X40 367 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SLITRK4Q8IW52 837 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CCDC28AQ8IWP9 274 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 BMPERQ8N8U9 685 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TSTD1Q8NFU3 115 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 C15orf40Q8WUR7 153 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FGF11Q92914 225 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TM4SF18Q96CE8 201 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FCRL4Q96PJ5 515 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 F2RL3Q96RI0 385 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FERD3LQ96RJ6 166 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms