RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 LSM12Q3MHD2 195 aaKnown RBP17.15■□□□□ 0.34
CLN6-213ENST00000636212 XKR7Q5GH72 579 aa17.15■□□□□ 0.34
CLN6-213ENST00000636212 CPTPQ5TA50 214 aa17.15■□□□□ 0.34
CLN6-213ENST00000636212 MFSD12Q6NUT3 480 aa17.15■□□□□ 0.34
CLN6-213ENST00000636212 GCNT2Q8N0V5 402 aa17.15■□□□□ 0.34
CLN6-213ENST00000636212 FBXO30Q8TB52 745 aa17.15■□□□□ 0.34
CLN6-213ENST00000636212 C1GALT1C1Q96EU7 318 aa17.15■□□□□ 0.34
CLN6-213ENST00000636212 G6PC3Q9BUM1 346 aa17.15■□□□□ 0.34
CLN6-213ENST00000636212 CLEC4MQ9H2X3 399 aaPredicted RBP17.15■□□□□ 0.34
CLN6-213ENST00000636212 ZDHHC2Q9UIJ5 367 aa17.15■□□□□ 0.34
CLN6-213ENST00000636212 SNX8Q9Y5X2 465 aa17.15■□□□□ 0.34
CLN6-213ENST00000636212 PDZD2O15018 2839 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 SLC22A20A6NK97 555 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 C17orf51A8MQB3 221 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 H3BML4 177 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 SEC14L5O43304 696 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 HCRTR2O43614 444 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 TYROBPO43914 113 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 SOX30O94993 753 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 CRHP06850 196 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 KRT16P08779 473 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 ACP2P11117 423 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 PRPS1L1P21108 318 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 B3GALT5-AS1P59052 145 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 FOXF2Q12947 444 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.14■□□□□ 0.33
CLN6-213ENST00000636212 SPDYE7PQ495Y7 208 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 C6orf136Q5SQH8 315 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 IL23RQ5VWK5 629 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 LUZP2Q86TE4 346 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 EXOC3L1Q86VI1 746 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 OR7A2PQ8NGA2 310 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 OR5P2Q8WZ92 322 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 HOXB13Q92826 284 aaPredicted RBP17.14■□□□□ 0.33
CLN6-213ENST00000636212 GPATCH1Q9BRR8 931 aaKnown RBP17.14■□□□□ 0.33
CLN6-213ENST00000636212 C1orf50Q9BV19 199 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 PARD6BQ9BYG5 372 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 JKAMPQ9P055 326 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 GIMAP2Q9UG22 337 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 PACSIN3Q9UKS6 424 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 DCHS2Q6V1P9 2916 aa17.14■□□□□ 0.33
CLN6-213ENST00000636212 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 OR2M5A3KFT3 312 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 A6NNC1 897 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 SCDO00767 359 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 GMFGO60234 142 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 KCNK2O95069 426 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 SNUPNO95149 360 aaKnown RBP17.13■□□□□ 0.33
CLN6-213ENST00000636212 OXSR1O95747 527 aaPredicted RBP17.13■□□□□ 0.33
CLN6-213ENST00000636212 IGKV1D-16P01601 117 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 NGFRP08138 427 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 MYZAPP0CAP1 466 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 EPXP11678 715 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 CD1EP15812 388 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 CREB1P16220 341 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 EFNA1P20827 205 aaPredicted RBP17.13■□□□□ 0.33
CLN6-213ENST00000636212 ATP6V1C1P21283 382 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 TBXA2RP21731 343 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 MAP3K8P41279 467 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 POU6F2P78424 691 aaPredicted RBP17.13■□□□□ 0.33
CLN6-213ENST00000636212 FIGNL1Q6PIW4 674 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 CROCCP2Q86T23 111 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 MISPQ8IVT2 679 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 KIRREL3Q8IZU9 778 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 SLC16A11Q8NCK7 471 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 OR56A1Q8NGH5 318 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 SMPDL3BQ92485 455 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 MOAP1Q96BY2 351 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 FAM120BQ96EK7 910 aaKnown RBP17.13■□□□□ 0.33
CLN6-213ENST00000636212 GIMAP5Q96F15 307 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 ZIM3Q96PE6 472 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 YIPF4Q9BSR8 244 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 CENPHQ9H3R5 247 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 UBQLN4Q9NRR5 601 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 RASSF1Q9NS23 344 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 FAF1Q9UNN5 650 aaPredicted RBP17.13■□□□□ 0.33
CLN6-213ENST00000636212 ZNF337Q9Y3M9 751 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 AP4B1Q9Y6B7 739 aa17.13■□□□□ 0.33
CLN6-213ENST00000636212 A0A087WZY1 265 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 UQCRHLA0A096LP55 91 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 IGLV3-32A0A0A0MS00 114 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 WDR91A4D1P6 747 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 ALG1L2C9J202 215 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 TM9SF1O15321 606 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 BIRC5O15392 142 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 CFLARO15519 480 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 TNFRSF21O75509 655 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 GOSR1O95249 250 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 SERPINE1P05121 402 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 HMGN2P05204 90 aaKnown RBP17.12■□□□□ 0.33
CLN6-213ENST00000636212 TUBBP07437 444 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 LAMP1P11279 417 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 ETV4P43268 484 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 CCT3P49368 545 aaKnown RBP17.12■□□□□ 0.33
CLN6-213ENST00000636212 ZNF41P51814 821 aaPredicted RBP17.12■□□□□ 0.33
CLN6-213ENST00000636212 PTGR1Q14914 329 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 SGCBQ16585 318 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 DUSP5Q16690 384 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 BHLHB9Q6PI77 547 aa17.12■□□□□ 0.33
CLN6-213ENST00000636212 GALNT10Q86SR1 603 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms