RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TSPAN33Q86UF1 283 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 GTPBP8Q8N3Z3 284 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TMEM178AQ8NBL3 297 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 CLEC4CQ8WTT0 213 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 FGGYQ96C11 551 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 FAM71F1Q96KD3 344 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 PPA2Q9H2U2 334 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MINDY3Q9H8M7 445 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 KLHL9Q9P2J3 617 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 CACNG4Q9UBN1 327 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MYOCOSA0A1B0GUC4 107 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CD8B2A6NJW9 211 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 C1orf196B1AJZ1 125 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TGFB1I1O43294 461 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 MED6O75586 246 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 RFPL1O75677 317 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TK1P04183 234 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ITGB2P05107 769 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 EDN1P05305 212 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ADH4P08319 380 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF728P0DKX0 622 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CD8BP10966 210 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 G6PDP11413 515 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 PTH2RP49190 550 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 NDUFA6P56556 154 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 FXNQ16595 210 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF404Q494X3 552 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CES4AQ5XG92 561 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF765Q7L2R6 523 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 FAM83FQ8NEG4 500 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 C17orf50Q8WW18 174 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 DCUN1D4Q92564 292 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SLC2A8Q9NY64 477 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SLC23A2Q9UGH3 650 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 RCCD1A6NED2 376 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 NFKBIEO00221 500 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ADAM23O75077 832 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF254O75437 659 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TUSC2O75896 110 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SIX3O95343 332 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TIA1P31483 386 aaKnown RBP eCLIP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CATR1Q13166 79 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 RAB35Q15286 201 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 OR7A5Q15622 319 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF718Q3SXZ3 478 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZBED5Q49AG3 693 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 B3GLCTQ6Y288 498 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 STEAP2Q8NFT2 490 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 OR1J4Q8NGS1 313 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TERB2Q8NHR7 220 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TCTEX1D2Q8WW35 142 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TOMM40LQ969M1 308 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SCRN2Q96FV2 425 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 IER2Q9BTL4 223 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 PCDHAC1Q9H158 963 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 PARP4Q9UKK3 1724 aaKnown RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SOWAHBA6NEL2 793 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 A8MT66 165 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 C12orf71A8MTZ7 269 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 C17orf105B2RV13 164 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 GDF5P43026 501 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ATP1B3P54709 279 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TAS2R38P59533 333 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 NXPE4Q6UWF7 544 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 FBXW12Q6X9E4 464 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TRIM74Q86UV6 250 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 KLBQ86Z14 1044 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZFP82Q8N141 532 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ACBD7Q8N6N7 88 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SMG8Q8ND04 991 aaKnown RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 C10orf82Q8WW14 230 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 HLA-CQ95604 372 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ARL11Q969Q4 196 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZDHHC16Q969W1 377 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF419Q96HQ0 510 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 FAM84AQ96KN4 292 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CNTNAP3BQ96NU0 1288 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 MYADMQ96S97 322 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ARL6Q9H0F7 186 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 FN3KRPQ9HA64 309 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ELOVL3Q9HB03 270 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 B4GALT6Q9UBX8 382 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 A0A0J9YY10 115 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 HTRA2O43464 458 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TRAF3IP2O43734 574 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 PRAMEF11O60813 436 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 JRKO75564 520 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 DNASE1P24855 282 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 GPR4P46093 362 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 MYBPHQ13203 477 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 MOB3CQ70IA8 216 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TMEM110Q86TL2 294 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 IGFN1Q86VF2 1251 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 PPP1R3BQ86XI6 285 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SULF2Q8IWU5 870 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF687Q8N1G0 1237 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TEX26Q8N6G2 289 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 OR6T1Q8NGN1 323 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 PIGCQ92535 297 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 LRCH3Q96II8 777 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms