RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CIDEBQ9UHD4 219 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 ENOPH1Q9UHY7 261 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 MRM2Q9UI43 246 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 NOCTQ9UK39 431 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 FAM96BQ9Y3D0 163 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 HYOU1Q9Y4L1 999 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 LSM4Q9Y4Z0 139 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CSDC2Q9Y534 153 aaKnown RBP2.69□□□□□ -1.98
PSPC1-208ENST00000635562 PPIAL4AQ9Y536 164 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 LRP12Q9Y561 859 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 HS3ST3B1Q9Y662 390 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 URGCP-MRPS24S4R325 110 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 CKAP5Q14008 2032 aa2.69□□□□□ -1.98
PSPC1-208ENST00000635562 LOC105371242A0A075B767 164 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 IGLV5-39A0A0G2JS06 123 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 GNG14A0A1W2PPG7 69 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 A0A1W2PQ67 120 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 RNF222A6NCQ9 220 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 SRRM3A6NNA2 597 aaPredicted RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 HEPACAM2A8MVW5 462 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF99A8MXY4 864 aaPredicted RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 MIF4GDA9UHW6 222 aaKnown RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 E9PQ18 207 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 F8VP50 259 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 SMLR1H3BR10 107 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 I6L893 689 aaPredicted RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 LAD1O00515 517 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 CYB561D2O14569 222 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 WNT9BO14905 357 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 RAB29O14966 203 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 OR1F1O43749 312 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 VAPBO95292 243 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 FADS2O95864 444 aaKnown RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 RPN2P04844 631 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 SERPINA5P05154 406 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 DCNP07585 359 aaKnown RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 GIMD1P0DJR0 217 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ETFAP13804 333 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ARSBP15848 533 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ACADSP16219 412 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 TNNI1P19237 187 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 DTYMKP23919 212 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 MMP11P24347 488 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 STOMP27105 288 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 BDKRB2P30411 391 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 SERPINB1P30740 379 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 OR1E1P30953 314 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 HNRNPH3P31942 346 aaKnown RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 MAGEA2P43356 314 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 MAGEA11P43364 429 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 OR3A1P47881 315 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 SLC6A8P48029 635 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 RFX5P48382 616 aaPredicted RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 MRPL19P49406 292 aaKnown RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 TMPRSS3P57727 454 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ZP1P60852 638 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ATP6V0D1P61421 351 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ERVS71-1P61550 626 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 PPIAP62937 165 aaKnown RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 PITPNAQ00169 270 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 DSC1Q08554 894 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ST3GAL1Q11201 340 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 KRT33BQ14525 404 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 P2RY14Q15391 338 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 TAF13Q15543 124 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 FAM189A2Q15884 450 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 SLC15A2Q16348 729 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 RBBP7Q16576 425 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 IMPG1Q17R60 797 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 EXOC3L4Q17RC7 722 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 TCTN1Q2MV58 587 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 DCAF4L1Q3SXM0 396 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 CHRFAM7AQ494W8 412 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ZCWPW2Q504Y3 356 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 CMPK2Q5EBM0 449 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 TEX30Q5JUR7 227 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 C6orf141Q5SZD1 244 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 BEND3Q5T5X7 828 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 GPR107Q5VW38 600 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ADNP2Q6IQ32 1131 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 PRR27Q6MZM9 219 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 C11orf63Q6NUN7 778 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ANKRD54Q6NXT1 300 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 CD164L2Q6UWJ8 174 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 BTNL8Q6UX41 500 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 PLXDC2Q6UX71 529 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 HSDL2Q6YN16 418 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 CDHR3Q6ZTQ4 885 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 LINGO2Q7L985 606 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 GPR141Q7Z602 305 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ZC3HC1Q86WB0 502 aaKnown RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 MEX3DQ86XN8 651 aaKnown RBP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 DCUN1D3Q8IWE4 304 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 GPALPP1Q8IXQ4 340 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF100Q8IYN0 542 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ZBED8Q8IZ13 594 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 ZNF34Q8IZ26 560 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 APCDD1Q8J025 514 aa2.68□□□□□ -1.98
PSPC1-208ENST00000635562 LINC00518Q8N0U6 118 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms