RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	NOXRED1	Q6NXP6	359 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	CEACAM20	Q6UY09	585 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC2A6	Q9UGQ3	507 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SALL3	Q9BXA9	1300 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ZNF701	M0R085	212 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	NAT2	P11245	290 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ADH5	P11766	374 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ZNF44	P15621	663 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	NFYA	P23511	347 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	UFM1	P61960	85 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	MEF2A	Q02078	507 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	HACD4	Q5VWC8	232 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	MED18	Q9BUE0	208 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SMG9	Q9H0W8	520 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC39A9	Q9NUM3	307 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	HLCS	P50747	726 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	PIGF	Q07326	219 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	DUOXA1	Q1HG43	343 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ENTHD1	Q8IYW4	607 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	PLA2G15	Q8NCC3	412 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	NANOS1	Q8WY41	292 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	APOBEC3G	Q9HC16	384 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	FZD10	Q9ULW2	581 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ERVW-1	Q9UQF0	538 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ASB3	Q9Y575	518 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC38A8	A6NNN8	435 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	DENR	O43583	198 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	OR5H8	P0DN80	308 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	TYR	P14679	529 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	HOXA11	P31270	313 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	RPS5	P46782	204 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	GSK3B	P49841	420 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	TMEM97	Q5BJF2	176 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC35D2	Q76EJ3	337 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	LYSMD3	Q7Z3D4	306 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	INTS12	Q96CB8	462 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	FAM46A	Q96IP4	442 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	INTS14	Q96SY0	518 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	HDHD5	Q9BXW7	423 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SRA1	Q9HD15	236 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ASB6	Q9NWX5	421 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	UTS2R	Q9UKP6	389 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	OR6C68	A6NDL8	312 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	METTL15	A6NJ78	407 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	C8G	P07360	202 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SELP	P16109	830 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SPI1	P17947	270 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	HCAR3	P49019	387 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	PSMB3	P49720	205 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	KCNAB2	Q13303	367 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	GAS6	Q14393	721 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ATP6AP1	Q15904	470 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	NNAT	Q16517	81 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	AWAT2	Q6E213	333 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SOX17	Q9H6I2	414 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SCPEP1	Q9HB40	452 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	RAB18	Q9NP72	206 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	FBXW11	Q9UKB1	542 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	OR2M5	A3KFT3	312 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	HLA-DQB2	P05538	268 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	IDUA	P35475	653 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	DHPS	P49366	369 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	CCR8	P51685	355 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	FFAR4	Q5NUL3	377 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC27A4	Q6P1M0	643 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	MEX3B	Q6ZN04	569 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	KLB	Q86Z14	1044 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	B3GNT7	Q8NFL0	401 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	STEAP2	Q8NFT2	490 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	GCDH	Q92947	438 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ZNF768	Q9H5H4	540 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ACOT13	Q9NPJ3	140 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	VPS29	Q9UBQ0	182 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ZNF860	A6NHJ4	632 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348		J3KR12	359 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	P2RX6	O15547	441 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	FGF7	P21781	194 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	PTGER3	P43115	390 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	MRPL49	Q13405	166 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	EIF4H	Q15056	248 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	ZNF573	Q86YE8	665 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	TMEM156	Q8N614	296 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	IL17RC	Q8NAC3	791 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	OR2T33	Q8NG76	320 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	OR51B5	Q9H339	312 aa		10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	COL5A2	P05997	1499 aa	Predicted RBP	10.79	□□□□□ -0.68
SRSF4-208	ENST00000634348	SUSD5	O60279	629 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348	TTR	P02766	147 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348	CFH	P08603	1231 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348	KRTDAP	P60985	99 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC14A1	Q13336	389 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348	IL34	Q6ZMJ4	242 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348		Q6ZVU0	165 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348	NAALAD2	Q9Y3Q0	740 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348	TMEM14A	Q9Y6G1	99 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348	CYB5B	O43169	146 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348	PI15	O43692	258 aa		10.78	□□□□□ -0.68
SRSF4-208	ENST00000634348	CLDN7	O95471	211 aa		10.78	□□□□□ -0.68

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