RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TVP23BQ9NYZ1 205 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.24□□□□□ -0.93
VTA1-205ENST00000620996 IFT52Q9Y366 437 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 HSPE1-MOB4S4R3N1 261 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 UNC13CQ8NB66 2214 aa9.24□□□□□ -0.93
VTA1-205ENST00000620996 VPS13AQ96RL7 3174 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 TGFBR3LH3BV60 316 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 NUDT21O43809 227 aaKnown RBP9.23□□□□□ -0.93
VTA1-205ENST00000620996 PLOD3O60568 738 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 WBP4O75554 376 aaKnown RBP9.23□□□□□ -0.93
VTA1-205ENST00000620996 CBX7O95931 251 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 OSMP13725 252 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 FOLR1P15328 257 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 CSF2RBP32927 897 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 FHL5Q5TD97 284 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 CCDC103Q8IW40 242 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 CACTIN-AS1Q8N1I8 211 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 ZNF619Q8N2I2 560 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 APH1BQ8WW43 257 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 PMEPA1Q969W9 287 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 MARCH7Q9H992 704 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 DNAJC27Q9NZQ0 273 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 EPHA6Q9UF33 1036 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 CCRL2O00421 344 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 CTNSO60931 367 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 B3GALNT1O75752 331 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 MMP11P24347 488 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 PRKAR1BP31321 381 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 GPR4P46093 362 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 MLLT10P55197 1068 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 EMX1Q04741 257 aaPredicted RBP9.23□□□□□ -0.93
VTA1-205ENST00000620996 TRAM2Q15035 370 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 STK11Q15831 433 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 MRPL2Q5T653 305 aaKnown RBP9.23□□□□□ -0.93
VTA1-205ENST00000620996 ARHGAP40Q5TG30 622 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 PRAMEF8Q5VWM4 474 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 PRAMEF7Q5VXH5 474 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 XAF1Q6GPH4 301 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 ZAR1Q86SH2 424 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 RANBP3LQ86VV4 465 aaPredicted RBP9.23□□□□□ -0.93
VTA1-205ENST00000620996 CROCCP3Q8IVE0 287 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 ZNF595Q8IYB9 648 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 OTULINQ96BN8 352 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 OR8D2Q9GZM6 311 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 FOLH1BQ9HBA9 442 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 IL20RAQ9UHF4 553 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 SLC7A7Q9UM01 511 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 ZDBF2Q9HCK1 2354 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 A0A087WV62 115 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 H3BUI4 141 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 HSMCR30P0CW71 290 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 PRG2P13727 222 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 SOX18P35713 384 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 EPHA4P54764 986 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 CFHR1Q03591 330 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 ST3GAL3Q11203 375 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 FAM53BQ14153 422 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 TRIM16LQ309B1 348 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 EIPR1Q53HC9 387 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 HEPHL1Q6MZM0 1159 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 BORAQ6PGQ7 559 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 ZER1Q7Z7L7 766 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 SNX29P2Q8IUI4 249 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 NKAIN4Q8IVV8 208 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 OR1L3Q8NH93 324 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 SLC41A3Q96GZ6 507 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 PLEKHA8Q96JA3 519 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 GAL3ST4Q96RP7 486 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 GTPBP2Q9BX10 602 aaKnown RBP9.23□□□□□ -0.93
VTA1-205ENST00000620996 EGLN3Q9H6Z9 239 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 NECTIN3Q9NQS3 549 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 CLN6Q9NWW5 311 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 ZNF226Q9NYT6 803 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 GMEB2Q9UKD1 530 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 DTX4Q9Y2E6 619 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 A0A0C4DFX4 3053 aa9.23□□□□□ -0.93
VTA1-205ENST00000620996 A0A1W2PRQ8 180 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 TRIM64A6NGJ6 449 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 ZNF99A8MXY4 864 aaPredicted RBP9.22□□□□□ -0.93
VTA1-205ENST00000620996 C17orf105B2RV13 164 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 GNB5O14775 395 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 PIP5K1CO60331 668 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 TSPAN9O75954 239 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 C21orf33P30042 268 aaPredicted RBP9.22□□□□□ -0.93
VTA1-205ENST00000620996 TTKP33981 857 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 NR4A2P43354 598 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 MGAT2Q10469 447 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 CCDC58Q4VC31 144 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 PDZK1Q5T2W1 519 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 ZNF770Q6IQ21 691 aaPredicted RBP9.22□□□□□ -0.93
VTA1-205ENST00000620996 GUSBP11Q6P575 273 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 BCDIN3DQ7Z5W3 292 aaKnown RBP9.22□□□□□ -0.93
VTA1-205ENST00000620996 C17orf82Q86X59 251 aaPredicted RBP9.22□□□□□ -0.93
VTA1-205ENST00000620996 EID2Q8N6I1 236 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 TCEANCQ8N8B7 351 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 TSLPQ969D9 159 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 CNDP2Q96KP4 475 aaKnown RBP9.22□□□□□ -0.93
VTA1-205ENST00000620996 CD180Q99467 661 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 ARHGDIGQ99819 225 aa9.22□□□□□ -0.93
VTA1-205ENST00000620996 MAN2C1Q9NTJ4 1040 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms