RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 RNF170Q96K19 258 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 CASKO14936 926 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 HLA-DQB1P01920 261 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 MYL9P24844 172 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 DSG2Q14126 1118 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 LTB4RQ15722 352 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 DGLUCYQ7Z3D6 616 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 MFSD9Q8NBP5 474 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 KAT2AQ92830 837 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 ATF6BQ99941 703 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 ACTRT3Q9BYD9 372 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 RNF121Q9H920 327 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 RMI1Q9H9A7 625 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 MED17Q9NVC6 651 aa28.04■■■□□ 2.08
KHSRP-213ENST00000619396 PRSS38A1L453 326 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 IGHA1P01876 353 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 CSF2P04141 144 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 TSFMP43897 325 aaKnown RBP28.03■■■□□ 2.08
KHSRP-213ENST00000619396 PDX1P52945 283 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 TFF2Q03403 129 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 MADCAM1Q13477 382 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 LRRC32Q14392 662 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 TMEM44Q2T9K0 475 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 SRFBP1Q8NEF9 429 aaKnown RBP28.03■■■□□ 2.08
KHSRP-213ENST00000619396 FRMD6Q96NE9 622 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 FCRL4Q96PJ5 515 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 COQ7Q99807 217 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 NUFIP1Q9UHK0 495 aaKnown RBP28.03■■■□□ 2.08
KHSRP-213ENST00000619396 SHISA3A0PJX4 238 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 CDK10Q15131 360 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 HEPHL1Q6MZM0 1159 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 CNIH2Q6PI25 160 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 C16orf62Q7Z3J2 963 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 GDF7Q7Z4P5 450 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 BBS1Q8NFJ9 593 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 OR4E2Q8NGC2 313 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 OR1E3Q8WZA6 343 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 C6orf106Q9H6K1 298 aaPredicted RBP28.03■■■□□ 2.08
KHSRP-213ENST00000619396 MSRAQ9UJ68 235 aa28.03■■■□□ 2.08
KHSRP-213ENST00000619396 IFNA8P32881 189 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 GPR4P46093 362 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 SNRPNP63162 240 aaKnown RBP28.02■■■□□ 2.08
KHSRP-213ENST00000619396 FZD5Q13467 585 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 PGGHGQ32M88 737 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 LCN1P1Q5VSP4 162 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 SDE2Q6IQ49 451 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 MBOAT2Q6ZWT7 520 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 NRMQ8IXM6 262 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 MCHR1Q99705 422 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 SLX1AQ9BQ83 275 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 HDHD5Q9BXW7 423 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 PRUNE2Q8WUY3 3088 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 HPGDSO60760 199 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 CTHP32929 405 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 RGS8P57771 180 aaPredicted RBP28.02■■■□□ 2.08
KHSRP-213ENST00000619396 VASNQ6EMK4 673 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 ZNF425Q6IV72 752 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 ENPP7Q6UWV6 458 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 ZNF620Q6ZNG0 422 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 PLEKHM3Q6ZWE6 761 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 TMED9Q9BVK6 235 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 KLHL28Q9NXS3 571 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 CBLCQ9ULV8 474 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 ZNF780BQ9Y6R6 833 aa28.02■■■□□ 2.08
KHSRP-213ENST00000619396 A6NL46 340 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 GABRPO00591 440 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 PIP5K1CO60331 668 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 HCN1O60741 890 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 HTR1FP30939 366 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 MRPS15P82914 257 aaKnown RBP28.01■■■□□ 2.07
KHSRP-213ENST00000619396 METAP1DQ6UB28 335 aaPredicted RBP28.01■■■□□ 2.07
KHSRP-213ENST00000619396 UBE2J2Q8N2K1 259 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 KLHL36Q8N4N3 616 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 OR52N1Q8NH53 320 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 TSACCQ96A04 125 aaPredicted RBP28.01■■■□□ 2.07
KHSRP-213ENST00000619396 SLC41A3Q96GZ6 507 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 SENP5Q96HI0 755 aaPredicted RBP28.01■■■□□ 2.07
KHSRP-213ENST00000619396 C1QTNF7Q9BXJ2 289 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 TBC1D17Q9HA65 648 aa28.01■■■□□ 2.07
KHSRP-213ENST00000619396 ISM1B1AKI9 464 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 SLC2A10O95528 541 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 HLA-DPB1P04440 258 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 CELP19835 753 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 EVX1P49640 407 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 FRRS1Q6ZNA5 592 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 NRROSQ86YC3 692 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 MARCH9Q86YJ5 346 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 GALNT12Q8IXK2 581 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 ASCC1Q8N9N2 400 aaKnown RBP28■■■□□ 2.07
KHSRP-213ENST00000619396 TMEM255BQ8WV15 326 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 SPRYD4Q8WW59 207 aaPredicted RBP28■■■□□ 2.07
KHSRP-213ENST00000619396 C10orf90Q96M02 699 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 JAM3Q9BX67 310 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 RANGRFQ9HD47 186 aaPredicted RBP28■■■□□ 2.07
KHSRP-213ENST00000619396 AKAP8O43823 692 aaKnown RBP28■■■□□ 2.07
KHSRP-213ENST00000619396 OR5F1O95221 314 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 ASGR2P07307 311 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 ADAM15Q13444 863 aa28■■■□□ 2.07
KHSRP-213ENST00000619396 ZNF791Q3KP31 576 aaPredicted RBP28■■■□□ 2.07
KHSRP-213ENST00000619396 C6orf183Q5T699 404 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms