RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 RPS26P11Q5JNZ5 115 aaPredicted RBP13.5□□□□□ -0.25
CD48-203ENST00000613788 GLYATQ6IB77 296 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 IGFL3Q6UXB1 125 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 CCDC80Q76M96 950 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 OLIG3Q7RTU3 272 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 ULK2Q8IYT8 1036 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 ZADH2Q8N4Q0 377 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 OR10G3Q8NGC4 313 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 OR4C3Q8NH37 302 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 PAQR8Q8TEZ7 354 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 FIG4Q92562 907 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.5□□□□□ -0.25
CD48-203ENST00000613788 TIMMDC1Q9NPL8 285 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 MAGEL2Q9UJ55 1249 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 ABCG2Q9UNQ0 655 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 IFT52Q9Y366 437 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 SNX13Q9Y5W8 968 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 DSPPQ9NZW4 1301 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 DOCK10Q96BY6 2186 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 CHD8Q9HCK8 2581 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 AGAP5A6NIR3 686 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 NPIPB9F8W1W9 429 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 M0QX08 132 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ICOSLGO75144 302 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 UGT2B17O75795 530 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ZIC2O95409 532 aaPredicted RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 F10P00742 488 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 P04436 131 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 DBIP07108 87 aaKnown RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 IL7RP16871 459 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 AQP1P29972 269 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 RHDQ02161 417 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 SNTA1Q13424 505 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 LARS2Q15031 903 aaKnown RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 OR1C1Q15619 314 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ZNF141Q15928 474 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 GRAMD1BQ3KR37 738 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 DESI1Q6ICB0 168 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 SPINK14Q6IE38 97 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 TMEM81Q6P7N7 255 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 OR52P1PQ8NH57 321 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 SLC26A7Q8TE54 656 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 RASSF5Q8WWW0 418 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ZG16BQ96DA0 208 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ASB9Q96DX5 294 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ABHD17AQ96GS6 310 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 NODALQ96S42 347 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 TBL1XR1Q9BZK7 514 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 METTL7AQ9H8H3 244 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 GORASP2Q9H8Y8 452 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 HHATLQ9HCP6 504 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 TUBD1Q9UJT1 453 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 DTNAQ9Y4J8 743 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 GPC6Q9Y625 555 aaPredicted RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 CHCHD2Q9Y6H1 151 aaPredicted RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 NPIPA5A0A0B4J1W7 369 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 A0A1W2PQD3 144 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ANKRD33BA6NCL7 494 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 NPIPA7E9PJI5 369 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 H3BNH8 94 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 FADS1O60427 444 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 GCM2O75603 506 aaPredicted RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 OXSR1O95747 527 aaPredicted RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 THBS1P07996 1170 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 NPIPA8P0DM63 369 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 CD46P15529 392 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ENDOUP21128 410 aaKnown RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 EVI2BP34910 448 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 CASP3P42574 277 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 TRAP1Q12931 704 aaKnown RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 KCNAB2Q13303 367 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 KLHL26Q53HC5 615 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 TBCELQ5QJ74 424 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 C19orf48Q6RUI8 117 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ARMC8Q8IUR7 673 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ZNF614Q8N883 585 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 BHLHE22Q8NFJ8 381 aaPredicted RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 FAM162AQ96A26 154 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 CCDC124Q96CT7 223 aaKnown RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 CRELD1Q96HD1 420 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 SIGLEC12Q96PQ1 595 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 RAB3IPQ96QF0 476 aaPredicted RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 QRSL1Q9H0R6 528 aaKnown RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 PCDHAC1Q9H158 963 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ADNPQ9H2P0 1102 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ARMC7Q9H6L4 198 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 SH2D2AQ9NP31 389 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 SDHAF3Q9NRP4 125 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.49□□□□□ -0.25
CD48-203ENST00000613788 SACM1LQ9NTJ5 587 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 KLRF1Q9NZS2 232 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 ACTR3BQ9P1U1 418 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 SEC14L3Q9UDX4 400 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 LAMA5O15230 3695 aa13.49□□□□□ -0.25
CD48-203ENST00000613788 PRAMEF25A6NGN4 478 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 ALG1L2C9J202 215 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 SLC25A12O75746 678 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 NEURL1O76050 574 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 SORBS2O94875 1100 aaKnown RBP13.48□□□□□ -0.25
CD48-203ENST00000613788 MFN2O95140 757 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms