RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 GDE1Q9NZC3 331 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 USP36Q9P275 1121 aaKnown RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 NDRG2Q9UN36 371 aaKnown RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 ICKQ9UPZ9 632 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 PCDHGB2Q9Y5G2 931 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 A8MUA0 341 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 XKRYO14609 159 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 SLC48A1Q6P1K1 146 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 RASSF6Q6ZTQ3 369 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 CDH24Q86UP0 819 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 ZNF547Q8IVP9 402 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 CLDN22Q8N7P3 220 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 OR4C15Q8NGM1 316 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 OR4K13Q8NH42 304 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 ELP4Q96EB1 424 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 SPACA7Q96KW9 195 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 LINC00615Q96LM1 132 aaPredicted RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 NRTNQ99748 197 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 FAM83CQ9BQN1 747 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 GSDMCQ9BYG8 508 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 NOS1APO75052 506 aaPredicted RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 CHRM4P08173 479 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 GABRA5P31644 462 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 EPHA5P54756 1037 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 C1orf61Q13536 156 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 AMZ1Q400G9 498 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 ATAD3CQ5T2N8 411 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 ZNF761Q86XN6 746 aaPredicted RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 TMEFF1Q8IYR6 380 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 CDRT4Q8N9R6 151 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 GATSQ8NAP1 163 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 GPR32P1Q8NGA4 272 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 OR52E2Q8NGJ4 325 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 ACOT12Q8WYK0 555 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 MS4A6EQ96DS6 147 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 HSPA12BQ96MM6 686 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 SERINC2Q96SA4 455 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 SLC38A3Q99624 504 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 CHIAQ9BZP6 476 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 IRF2BPLQ9H1B7 796 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 MED20Q9H944 212 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 SIAEQ9HAT2 523 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 FTSJ1Q9UET6 329 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 ZNF443Q9Y2A4 671 aaPredicted RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 CA5BQ9Y2D0 317 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 TSPAN11A1L157 253 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ARRDC5A6NEK1 342 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 HMX3A6NHT5 357 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ZNF879B4DU55 563 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 H3BSH0 61 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 GABRPO00591 440 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 PPP1R3DO95685 299 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 HMGA2P52926 109 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 AP3S2P59780 193 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ALG10BQ5I7T1 473 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 LAIR1Q6GTX8 287 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 MOSPD2Q8NHP6 518 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 AKAP1Q92667 903 aaKnown RBP eCLIP8.13□□□□□ -1.11
LIG4-204ENST00000611712 FCRL1Q96LA6 429 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ZFYVE21Q9BQ24 234 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 NT5DC2Q9H857 520 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 HHATLQ9HCP6 504 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 SLAMF7Q9NQ25 335 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 UCKL1Q9NWZ5 548 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 THAP10Q9P2Z0 257 aaPredicted RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 POLR1DQ9Y2S0 133 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ANXA2P2A6NMY6 339 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 SYT5O00445 386 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 PDCD5O14737 125 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 CSTAP01040 98 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 GYPBP06028 91 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ANXA2P07355 339 aaKnown RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 PVRP15151 417 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 AHCYP23526 432 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 STOMP27105 288 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 TRIM23P36406 574 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 PDX1P52945 283 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 PSPHP78330 225 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 CDC20Q12834 499 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 EXOSC7Q15024 291 aaKnown RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 UBE2Q1Q7Z7E8 422 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 NKAIN4Q8IVV8 208 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ZNF676Q8N7Q3 588 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 TOR1AIP2Q8NFQ8 470 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 TMEM255BQ8WV15 326 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 TSEN15Q8WW01 171 aaKnown RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 BPIFA2Q96DR5 249 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 NEDD4LQ96PU5 975 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 C1QTNF2Q9BXJ5 285 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 TRIM2Q9C040 744 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 WASH6PQ9NQA3 447 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 BABAM2Q9NXR7 383 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 MRTO4Q9UKD2 239 aaKnown RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 SLC6A14Q9UN76 642 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 FKBP7Q9Y680 259 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 PRSS38A1L453 326 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 SOCS6O14544 535 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 LILRB3O75022 631 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms