RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	TIFAB	Q6ZNK6	161 aa		18.84	■□□□□ 0.61
NECAB3-222	ENST00000607805	OR6K3	Q8NGY3	331 aa		18.84	■□□□□ 0.61
NECAB3-222	ENST00000607805	HOXB13	Q92826	284 aa	Predicted RBP	18.84	■□□□□ 0.61
NECAB3-222	ENST00000607805	L3HYPDH	Q96EM0	354 aa		18.84	■□□□□ 0.61
NECAB3-222	ENST00000607805	ADGRG7	Q96K78	797 aa		18.84	■□□□□ 0.61
NECAB3-222	ENST00000607805	KCNA7	Q96RP8	456 aa		18.84	■□□□□ 0.61
NECAB3-222	ENST00000607805	GLIPR2	Q9H4G4	154 aa		18.84	■□□□□ 0.61
NECAB3-222	ENST00000607805	NFU1	Q9UMS0	254 aa		18.84	■□□□□ 0.61
NECAB3-222	ENST00000607805	TIMM22	Q9Y584	194 aa		18.84	■□□□□ 0.61
NECAB3-222	ENST00000607805	SHISA8	B8ZZ34	492 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	TMCC2	O75069	709 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	SS18L1	O75177	396 aa	Predicted RBP	18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	SOX30	O94993	753 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	PLAU	P00749	431 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	IGKV1D-16	P01601	117 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	SNRPA	P09012	282 aa	Known RBP	18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	IFI6	P09912	130 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	TAC1	P20366	129 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	MAP3K8	P41279	467 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	NCBP2	P52298	156 aa	Known RBP eCLIP	18.83	■□□□□ 0.6	3e-11	■■■□□ 15.5
NECAB3-222	ENST00000607805	PRKAA2	P54646	552 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	PKNOX1	P55347	436 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	C2orf80	Q0P641	193 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	LCP2	Q13094	533 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	CTU2	Q2VPK5	515 aa	Known RBP	18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	TEX35	Q5T0J7	233 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	ZNF704	Q6ZNC4	412 aa	Predicted RBP	18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	GFM2	Q969S9	779 aa	Known RBP	18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	ELP4	Q96EB1	424 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	AMDHD1	Q96NU7	426 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	TSPYL1	Q9H0U9	437 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805		Q9N2J8	555 aa		18.83	■□□□□ 0.6
NECAB3-222	ENST00000607805	UTS2	O95399	124 aa		18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	ANGPTL1	O95841	491 aa		18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	ATP5F1	P24539	256 aa	Predicted RBP	18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	BTK	Q06187	659 aa		18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	C17orf67	Q0P5P2	114 aa		18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	SPATA3	Q8NHX4	192 aa		18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	GMPPA	Q96IJ6	420 aa	Predicted RBP	18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	NPAS1	Q99742	590 aa		18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	MYNN	Q9NPC7	610 aa		18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	STK38L	Q9Y2H1	464 aa		18.82	■□□□□ 0.6
NECAB3-222	ENST00000607805	ZNF17	P17021	662 aa		18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	PSMA4	P25789	261 aa	Known RBP	18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	FOXA1	P55317	472 aa		18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	PPP2R2B	Q00005	443 aa		18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	EXOC3L2	Q2M3D2	409 aa		18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	GRAMD1B	Q3KR37	738 aa		18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	CXXC5	Q7LFL8	322 aa	Known RBP	18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	LCA5	Q86VQ0	697 aa		18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	ZNF611	Q8N823	705 aa		18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	TMEM171	Q8WVE6	324 aa		18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	GSTO2	Q9H4Y5	243 aa		18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	MRTO4	Q9UKD2	239 aa	Known RBP	18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	WBP11	Q9Y2W2	641 aa	Known RBP	18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	EMC9	Q9Y3B6	208 aa		18.81	■□□□□ 0.6
NECAB3-222	ENST00000607805	HEATR1	Q9H583	2144 aa	Known RBP	18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	GXYLT2	A0PJZ3	443 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	TTC36	A6NLP5	189 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	UBFD1	O14562	309 aa	Known RBP	18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	HS3ST1	O14792	307 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	ADAMDEC1	O15204	470 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	NID1	P14543	1247 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	CLK3	P49761	638 aa	Known RBP	18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	PSMD4	P55036	377 aa	Known RBP	18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	SGCB	Q16585	318 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	LGSN	Q5TDP6	509 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	SLC22A9	Q8IVM8	553 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	OR10D3	Q8NH80	312 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	FMO2	Q99518	471 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	TBL1XR1	Q9BZK7	514 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	OR10A4	Q9H209	315 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	DDX18	Q9NVP1	670 aa	Known RBP	18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805	CLEC4A	Q9UMR7	237 aa		18.8	■□□□□ 0.6
NECAB3-222	ENST00000607805		A0A087WUV0	522 aa	Predicted RBP	18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	C7orf72	A4D263	438 aa		18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	ALG1L2	C9J202	215 aa		18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	EIF1AY	O14602	144 aa	Known RBP	18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	NGFR	P08138	427 aa		18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	GABRA3	P34903	492 aa		18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	EIF1AX	P47813	144 aa	Known RBP	18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	NR1H2	P55055	460 aa		18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	CKAP4	Q07065	602 aa	Known RBP	18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	ZNHIT3	Q15649	155 aa	Predicted RBP	18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	TRIM46	Q7Z4K8	759 aa		18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	FAM76A	Q8TAV0	307 aa		18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	PLPPR2	Q96GM1	343 aa		18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	MIEF1	Q9NQG6	463 aa		18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	PAQR5	Q9NXK6	330 aa	Predicted RBP	18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805	VDAC3	Q9Y277	283 aa		18.79	■□□□□ 0.6
NECAB3-222	ENST00000607805		A0A087WZY1	265 aa		18.78	■□□□□ 0.6
NECAB3-222	ENST00000607805	CCDC151	A5D8V7	595 aa		18.78	■□□□□ 0.6
NECAB3-222	ENST00000607805	CRLF1	O75462	422 aa		18.78	■□□□□ 0.6
NECAB3-222	ENST00000607805	NKX2-2	O95096	273 aa		18.78	■□□□□ 0.6
NECAB3-222	ENST00000607805	PSMB1	P20618	241 aa	Known RBP	18.78	■□□□□ 0.6
NECAB3-222	ENST00000607805	NTS	P30990	170 aa		18.78	■□□□□ 0.6
NECAB3-222	ENST00000607805	ZNF844	Q08AG5	666 aa		18.78	■□□□□ 0.6
NECAB3-222	ENST00000607805	TNK1	Q13470	666 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms