RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 GRIP2Q9C0E4 1043 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 STRADBQ9C0K7 418 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 BATF3Q9NR55 127 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 PAPOLBQ9NRJ5 636 aaKnown RBP19.96■□□□□ 0.79
USP6NL-204ENST00000606752 PCDHGA10Q9Y5H3 936 aa19.96■□□□□ 0.79
USP6NL-204ENST00000606752 FRG2CA6NGY1 282 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 TMX2-CTNND1H3BSU7 103 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 RFPL3O75679 317 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 CBLP22681 906 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 PSMD4P55036 377 aaKnown RBP19.95■□□□□ 0.78
USP6NL-204ENST00000606752 TAS2R41P59536 307 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 ZNF141Q15928 474 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 ZNF770Q6IQ21 691 aaPredicted RBP19.95■□□□□ 0.78
USP6NL-204ENST00000606752 MRPL14Q6P1L8 145 aaKnown RBP19.95■□□□□ 0.78
USP6NL-204ENST00000606752 SLC7A13Q8TCU3 470 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 ADIPOR1Q96A54 375 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 LCORQ96JN0 433 aaPredicted RBP19.95■□□□□ 0.78
USP6NL-204ENST00000606752 SPSB2Q99619 263 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 MCHR1Q99705 422 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 PRR14Q9BWN1 585 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 ZNF696Q9H7X3 374 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 EVA1AQ9H8M9 152 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 AKIRIN1Q9H9L7 192 aaPredicted RBP19.95■□□□□ 0.78
USP6NL-204ENST00000606752 MAN2C1Q9NTJ4 1040 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 POFUT2Q9Y2G5 429 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 C2orf92A0A1B0GVN3 265 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 OR6C76A6NM76 312 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 NPIPB9F8W1W9 429 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 CNOT3O75175 753 aaKnown RBP19.95■□□□□ 0.78
USP6NL-204ENST00000606752 CYC1P08574 325 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 ATP12AP54707 1039 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 INSM1Q01101 510 aaPredicted RBP19.95■□□□□ 0.78
USP6NL-204ENST00000606752 NPRL3Q12980 569 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 SEC23BQ15437 767 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 DECR1Q16698 335 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 PDZK1Q5T2W1 519 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 ISLR2Q6UXK2 745 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 C8orf59Q8N0T1 100 aaPredicted RBP19.95■□□□□ 0.78
USP6NL-204ENST00000606752 AQP11Q8NBQ7 271 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 NIPSNAP1Q9BPW8 284 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 ULBP3Q9BZM4 244 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 NXF5Q9H1B4 397 aaKnown RBP19.95■□□□□ 0.78
USP6NL-204ENST00000606752 WDR54Q9H977 334 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 CTPS2Q9NRF8 586 aa19.95■□□□□ 0.78
USP6NL-204ENST00000606752 SH3PXD2BA1X283 911 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 GASTP01350 101 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 SLC5A2P31639 672 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 GPR143P51810 404 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 RPS6KA3P51812 740 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 ZNF136P52737 540 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 HOXC5Q00444 222 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 ST3GAL3Q11203 375 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 TCF15Q12870 199 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 IL18R1Q13478 541 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 EBPQ15125 230 aaKnown RBP19.94■□□□□ 0.78
USP6NL-204ENST00000606752 ENTPD8Q5MY95 495 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 PODNL1Q6PEZ8 512 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 TTC33Q6PID6 262 aaPredicted RBP19.94■□□□□ 0.78
USP6NL-204ENST00000606752 THAP5Q7Z6K1 395 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 C9orf40Q8IXQ3 194 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 LINC00471Q8N535 108 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 DIO2Q92813 273 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 PMEPA1Q969W9 287 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 GABARAPL3Q9BY60 117 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.94■□□□□ 0.78
USP6NL-204ENST00000606752 NXT1Q9UKK6 140 aaKnown RBP19.94■□□□□ 0.78
USP6NL-204ENST00000606752 MYRFQ9Y2G1 1151 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 LOXL2Q9Y4K0 774 aa19.94■□□□□ 0.78
USP6NL-204ENST00000606752 CPSF4LA6NMK7 179 aaKnown RBP19.93■□□□□ 0.78
USP6NL-204ENST00000606752 BCKDKO14874 412 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 LRP3O75074 770 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 CYP7B1O75881 506 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 SEC24DO94855 1032 aaPredicted RBP19.93■□□□□ 0.78
USP6NL-204ENST00000606752 ZSWIM7Q19AV6 140 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 HLA-DQA1Q5Y7H0 255 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 SLC29A4Q7RTT9 530 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 RANBP3LQ86VV4 465 aaPredicted RBP19.93■□□□□ 0.78
USP6NL-204ENST00000606752 ADAMTS16Q8TE57 1224 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 GAL3ST4Q96RP7 486 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 CRB3Q9BUF7 120 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 ANKRD19PQ9H560 264 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 GPN3Q9UHW5 284 aaPredicted RBP19.93■□□□□ 0.78
USP6NL-204ENST00000606752 MRTO4Q9UKD2 239 aaKnown RBP19.93■□□□□ 0.78
USP6NL-204ENST00000606752 MGAT4BQ9UQ53 548 aa19.93■□□□□ 0.78
USP6NL-204ENST00000606752 IGHV3-20A0A0C4DH32 117 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 H3BNH8 94 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 PRKNO60260 465 aaPredicted RBP19.92■□□□□ 0.78
USP6NL-204ENST00000606752 OR10H3O60404 316 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 OR5F1O95221 314 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 IL33O95760 270 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 CYP4B1P13584 511 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 ITIH1P19827 911 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 TPD52P55327 224 aaPredicted RBP19.92■□□□□ 0.78
USP6NL-204ENST00000606752 RAB15P59190 212 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 KEAP1Q14145 624 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 TRAM2Q15035 370 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 ISXQ2M1V0 245 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 DCAF12Q5T6F0 453 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 ZNF691Q5VV52 312 aa19.92■□□□□ 0.78
USP6NL-204ENST00000606752 CDCP2Q5VXM1 449 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms