RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ZNF517Q6ZMY9 492 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PARS2Q7L3T8 475 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CXXC5Q7LFL8 322 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PRSS48Q7RTY5 328 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 NANOGP1Q8N7R0 232 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 FAM47BQ8NA70 645 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CHDHQ8NE62 594 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 OR4A16Q8NH70 328 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 NRGNQ92686 78 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TMEM45BQ96B21 275 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SHISA4Q96DD7 197 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 C14orf144Q96I85 54 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 GPR137Q96N19 417 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TAAR6Q96RI8 345 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 RAB40CQ96S21 281 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 DCLRE1CQ96SD1 692 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PCDHB18PQ96TA0 734 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CSF3RQ99062 836 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MYOCQ99972 504 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TSSK1BQ9BXA7 367 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 HDHD5Q9BXW7 423 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TRIM9Q9C026 710 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 DUSP15Q9H1R2 295 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ANKRD19PQ9H560 264 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 VAT1LQ9HCJ6 419 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 LIN7CQ9NUP9 197 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MED9Q9NWA0 146 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC23A1Q9UHI7 598 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 WIF1Q9Y5W5 379 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 NUBP2Q9Y5Y2 271 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 U3KQ87 197 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 GNG14A0A1W2PPG7 69 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 C5orf52A6NGY3 159 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 E5RI56 91 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SULT1C2O00338 296 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 HCN1O60741 890 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 UPK3AO75631 287 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TTC4O95801 387 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SERPINA5P05154 406 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 HOXC4P09017 264 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ANKRD34CP0C6C1 535 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ACSM4P0C7M7 580 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 LINC00614P0C842 121 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 HGFP14210 728 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PNLIPP16233 465 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TACR2P21452 398 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CCNOP22674 350 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 FPR3P25089 353 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MPIP34949 423 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC1A2P43004 574 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 RGRP47804 291 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MRPS22P82650 360 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SHC2P98077 582 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 GPNMBQ14956 572 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC9A3R2Q15599 337 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 GPR19Q15760 415 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MGAT5BQ3V5L5 792 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TMEM35AQ53FP2 167 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CXorf66Q5JRM2 361 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ACER2Q5QJU3 275 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PHF19Q5T6S3 580 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PNCKQ6P2M8 343 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 RNASEKQ6P5S7 137 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF773Q6PK81 442 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MPZL3Q6UWV2 235 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MOB3CQ70IA8 216 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 LGI2Q8N0V4 545 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 FAM58AQ8N1B3 248 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 DMBX1Q8NFW5 382 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ALG3Q92685 438 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TFAP2CQ92754 450 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 HOXB13Q92826 284 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ARRDC3Q96B67 414 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ASB9Q96DX5 294 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CPPED1Q9BRF8 314 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PKIBQ9C010 78 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC39A8Q9C0K1 460 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 DSN1Q9H410 356 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 RANGRFQ9HD47 186 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 IMP3Q9NV31 184 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 FBXL12Q9NXK8 326 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ARMCX1Q9P291 453 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 LEF1Q9UJU2 399 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ACSL6Q9UKU0 697 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MRPS18BQ9Y676 258 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CNTNAP4Q9C0A0 1308 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 M0QXV9 152 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SDHDO14521 159 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 LYPLA1O75608 230 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 NOL4O94818 638 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 NXPH2O95156 264 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CEACAM5P06731 702 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MYL2P10916 166 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CETPP11597 493 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MUC1P15941 1255 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ANXA7P20073 488 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 GSTM3P21266 225 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 EEF1B2P24534 225 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 IGFBP5P24593 272 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CCR7P32248 378 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms