RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 PRPS2P11908 318 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 CPA3P15088 417 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 GANABQ14697 944 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 APOOLQ6UXV4 268 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 TRIM46Q7Z4K8 759 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 KIF18AQ8NI77 898 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 MZB1Q8WU39 189 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 OTUB1Q96FW1 271 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 CHMP6Q96FZ7 201 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 TSSK3Q96PN8 268 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 LRTM1Q9HBL6 345 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 TAS2R7Q9NYW3 318 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 BAIAP2L1Q9UHR4 511 aa15.83■□□□□ 0.12
SHKBP1-223ENST00000600552 C16orf97H3BN30 126 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 SIAH2O43255 324 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 PLIN3O60664 434 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 SMPD2O60906 423 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 TNFRSF21O75509 655 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 SLITRK5O94991 958 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 PLGP00747 810 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 UROSP10746 265 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 HOXC12P31275 282 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 UGT2B10P36537 528 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 EIF1AXP47813 144 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 CCT5P48643 541 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 LTBQ06643 244 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 C17orf67Q0P5P2 114 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 ALKBH2Q6NS38 261 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 FIGNL1Q6PIW4 674 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 FAM76AQ8TAV0 307 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 PPCDCQ96CD2 204 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 SH3YL1Q96HL8 342 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 C18orf12Q96KH6 178 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 LMF2Q9BU23 707 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 ARID1AO14497 2285 aa15.82■□□□□ 0.12
SHKBP1-223ENST00000600552 DEFB108AA8MXU0 73 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 SLC28A1O00337 649 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 COPEO14579 308 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 SMAD7O15105 426 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 ARHGEF9O43307 516 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 EMC8O43402 210 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 RGS14O43566 566 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 AQP8O94778 261 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 INHBBP09529 407 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 LINC00032P0C843 101 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 RNF144AP50876 292 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 MANFP55145 182 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 KRTAP21-3Q3LHN1 58 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 CCDC153Q494R4 210 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 GALNTL6Q49A17 601 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 Q5PR19 223 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 CLEC9AQ6UXN8 241 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 IKBIPQ70UQ0 350 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 BIVMQ86UB2 503 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 HEATR5AQ86XA9 2040 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 C4orf33Q8N1A6 199 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 NUP43Q8NFH3 380 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 JADE3Q92613 823 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 TXLNGYQ9BZA5 131 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 TMEM185BQ9H7F4 350 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 OXSMQ9NWU1 459 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 C1orf109Q9NX04 203 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 ELOVL5Q9NYP7 299 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 WBP11Q9Y2W2 641 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 AP4B1Q9Y6B7 739 aa15.81■□□□□ 0.12
SHKBP1-223ENST00000600552 LINC01387J3KSC0 135 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 AZIN1O14977 448 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 NDUFB5O43674 189 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 PSMG1O95456 288 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 TBXA2RP21731 343 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 SLC6A8P48029 635 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 CTBP2P56545 445 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 DNAJB13P59910 316 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 RPL38P63173 70 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 ZNF385BQ569K4 471 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 SHEQ5VZ18 495 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 CXorf67Q86X51 503 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 C10orf107Q8IVU9 208 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 CEP70Q8NHQ1 597 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 ZFP28Q8NHY6 868 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 PERPQ96FX8 193 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 C16orf58Q96GQ5 468 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 HS3ST6Q96QI5 342 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 CCL19Q99731 98 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 REEP4Q9H6H4 257 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 RNF122Q9H9V4 155 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 STOML1Q9UBI4 398 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 ZNF175Q9Y473 711 aa15.8■□□□□ 0.12
SHKBP1-223ENST00000600552 KIF2AO00139 706 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 SYNGR4O95473 234 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 CGAP01215 116 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 ACP2P11117 423 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 HPGDP15428 266 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 CRYGSP22914 178 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 CCKARP32238 428 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 NAA20P61599 178 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 PRR5P85299 388 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 ACKR1Q16570 336 aa15.79■□□□□ 0.12
SHKBP1-223ENST00000600552 GLYR1Q49A26 553 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms