RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 SLC35B4Q969S0 331 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 TP53INP1Q96A56 240 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 C7orf34Q96L11 122 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 FNDC11Q9BVV2 318 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 GPR87Q9BY21 358 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 PRORYQ9H606 182 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 NDUFAF4Q9P032 175 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 MKLN1Q9UL63 735 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 ZNF443Q9Y2A4 671 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-210ENST00000600442 LRCH1Q9Y2L9 728 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 PTRH2Q9Y3E5 179 aaKnown RBP11.82□□□□□ -0.52
ZNF548-210ENST00000600442 CLDN16Q9Y5I7 305 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 B3GALT1Q9Y5Z6 326 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 KCNE3Q9Y6H6 103 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 CROCCQ5TZA2 2017 aa11.82□□□□□ -0.52
ZNF548-210ENST00000600442 COL6A6A6NMZ7 2263 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 SCN3AQ9NY46 2000 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 C21orf140B9A014 251 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 SCDO00767 359 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 ATXN7O15265 892 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-210ENST00000600442 ABCB7O75027 752 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 UGT2B17O75795 530 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 ZFAND5O76080 213 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 GADD45GO95257 159 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 IGKV3-11P04433 115 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 NID1P14543 1247 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 OR1E2P47887 323 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 RFX3P48380 749 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 ALDH3A2P51648 485 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 CLDN6P56747 220 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 RGS8P57771 180 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-210ENST00000600442 VLDLRP98155 873 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 PSG6Q00889 435 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 FUT5Q11128 374 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 MED21Q13503 144 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 DAG1Q14118 895 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 CMPK2Q5EBM0 449 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 OTUD3Q5T2D3 398 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-210ENST00000600442 RNF220Q5VTB9 566 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 FIGNL1Q6PIW4 674 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 PAPD4Q6PIY7 484 aaKnown RBP11.81□□□□□ -0.52
ZNF548-210ENST00000600442 TMEM205Q6UW68 189 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 FRRS1Q6ZNA5 592 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 WDR53Q7Z5U6 358 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-210ENST00000600442 ZNF440Q8IYI8 595 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 OR8K3Q8NH51 312 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 MAGEE2Q8TD90 523 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-210ENST00000600442 DOK4Q8TEW6 326 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 ZNF721Q8TF20 911 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 NXPE2Q96DL1 559 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 GAL3ST4Q96RP7 486 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 ITPAQ9BY32 194 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 KRCC1Q9NPI7 259 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-210ENST00000600442 UBQLN4Q9NRR5 601 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 SELENONQ9NZV5 590 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 AK5Q9Y6K8 562 aa11.81□□□□□ -0.52
ZNF548-210ENST00000600442 ATMQ13315 3056 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 RP1P56715 2156 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 PRAMEF27A3QJZ7 478 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 TLX3O43711 291 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-210ENST00000600442 FCMRO60667 390 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 H1F0P07305 194 aaKnown RBP11.8□□□□□ -0.52
ZNF548-210ENST00000600442 CT45A8P0DMV1 189 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 CT45A9P0DMV2 189 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 ZNF26P17031 533 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-210ENST00000600442 ZNF28P17035 718 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 ITIH1P19827 911 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 TMED10P49755 219 aaKnown RBP11.8□□□□□ -0.52
ZNF548-210ENST00000600442 CRYBA2P53672 197 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 ATP12AP54707 1039 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 TARDBPQ13148 414 aaKnown RBP eCLIP11.8□□□□□ -0.52
ZNF548-210ENST00000600442 EFR3AQ14156 821 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 MAPK11Q15759 364 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 NRF1Q16656 503 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 CT45A2Q5DJT8 189 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 C3orf38Q5JPI3 329 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 CCNJQ5T5M9 372 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 ZNF517Q6ZMY9 492 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-210ENST00000600442 DEF8Q6ZN54 512 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 LRRC69Q6ZNQ3 347 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 RRM2BQ7LG56 351 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 ZNF550Q7Z398 422 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 NLGN4XQ8N0W4 816 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 BCORP1Q8N888 145 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 ATG16L2Q8NAA4 619 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 ZNF555Q8NEP9 628 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 NLGN4YQ8NFZ3 816 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-210ENST00000600442 VANGL1Q8TAA9 524 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-210ENST00000600442 FAM110BQ8TC76 370 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 ZNF597Q96LX8 424 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 SPSB2Q99619 263 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 NUDT9Q9BW91 350 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 WWTR1Q9GZV5 400 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 SMPD3Q9NY59 655 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-210ENST00000600442 KCND3Q9UK17 655 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 PPIEQ9UNP9 301 aaKnown RBP11.8□□□□□ -0.52
ZNF548-210ENST00000600442 ABCG2Q9UNQ0 655 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 SLC35A3Q9Y2D2 325 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 TESMINQ9Y4I5 508 aa11.8□□□□□ -0.52
ZNF548-210ENST00000600442 PCDHGA10Q9Y5H3 936 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms