RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 C17orf51A8MQB3 221 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 A8MXE2 369 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 MSTNO14793 375 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 SPAG7O75391 227 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 TNFSF13O75888 250 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 SOX30O94993 753 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 HSPA4LO95757 839 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 TGM6O95932 706 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 IGKV1D-16P01601 117 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 TBXA2RP21731 343 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 RFX3P48380 749 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 PRKAG1P54619 331 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 STX5Q13190 355 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.27□□□□□ -0.13
VRK3-221ENST00000600284 XKR7Q5GH72 579 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 P4HA3Q7Z4N8 544 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 CDC20BQ86Y33 519 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 GCNT2Q8N0V5 402 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 CLHC1Q8NHS4 586 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 LINC01560Q8TB33 94 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 AENQ8WTP8 325 aaKnown RBP14.27□□□□□ -0.13
VRK3-221ENST00000600284 SLC9A6Q92581 669 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 NRGNQ92686 78 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 CAVIN3Q969G5 261 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 DACH2Q96NX9 599 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 MECRQ9BV79 373 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 TMEM109Q9BVC6 243 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 CXXC4Q9H2H0 198 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 GIN1Q9NXP7 522 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 AP4B1Q9Y6B7 739 aa14.27□□□□□ -0.13
VRK3-221ENST00000600284 TEP1Q99973 2627 aaKnown RBP14.27□□□□□ -0.13
VRK3-221ENST00000600284 HIVEP1P15822 2718 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 A0A1W2PNV4 684 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 OR2M5A3KFT3 312 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 SLC22A20A6NK97 555 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 TMEM233B4DJY2 109 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 SCAMP2O15127 329 aaKnown RBP14.26□□□□□ -0.13
VRK3-221ENST00000600284 NDUFB5O43674 189 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 LYPLA1O75608 230 aaPredicted RBP14.26□□□□□ -0.13
VRK3-221ENST00000600284 KCNK2O95069 426 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 ALOX5P09917 674 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 TCEA1P23193 301 aaKnown RBP14.26□□□□□ -0.13
VRK3-221ENST00000600284 HPCAL1P37235 193 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 CPA2P48052 419 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 SERPINB4P48594 390 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 PRIM2P49643 509 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 CLDN15P56746 228 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 TMEM44Q2T9K0 475 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 GRAMD1BQ3KR37 738 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 ATP6AP1LQ52LC2 224 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 EXOSC6Q5RKV6 272 aaKnown RBP14.26□□□□□ -0.13
VRK3-221ENST00000600284 MFSD12Q6NUT3 480 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 APOOLQ6UXV4 268 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 LUZP2Q86TE4 346 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 MISPQ8IVT2 679 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 UBQLNLQ8IYU4 475 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 SLC16A11Q8NCK7 471 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 ATAD3AQ9NVI7 634 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 GALNT8Q9NY28 637 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 ZNF175Q9Y473 711 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 CELSR1Q9NYQ6 3014 aa14.26□□□□□ -0.13
VRK3-221ENST00000600284 A0A087WZY1 265 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 A0A1W2PRB8 838 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 TYROBPO43914 113 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 PEX11AO75192 247 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 OXSR1O95747 527 aaPredicted RBP14.25□□□□□ -0.13
VRK3-221ENST00000600284 BPGMP07738 259 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 ACP2P11117 423 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 ZNF17P17021 662 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 DNASE1P24855 282 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 SUCLG1P53597 346 aaKnown RBP14.25□□□□□ -0.13
VRK3-221ENST00000600284 RIPPLY3P57055 190 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 RPS3AP61247 264 aaKnown RBP14.25□□□□□ -0.13
VRK3-221ENST00000600284 FGFBP1Q14512 234 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 C6orf136Q5SQH8 315 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 PLXDC2Q6UX71 529 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 ZCCHC23Q6ZST2 131 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 CAMKMTQ7Z624 323 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 EXOC3L1Q86VI1 746 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 METTL25Q8N6Q8 603 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 OR4C3Q8NH37 302 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 PSMA8Q8TAA3 256 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 ACTRT2Q8TDY3 377 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 OR5P2Q8WZ92 322 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 STARD4Q96DR4 205 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 FAM120BQ96EK7 910 aaKnown RBP14.25□□□□□ -0.13
VRK3-221ENST00000600284 STACQ99469 402 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 PRPF18Q99633 342 aaKnown RBP14.25□□□□□ -0.13
VRK3-221ENST00000600284 UBQLN4Q9NRR5 601 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 DUSP22Q9NRW4 184 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 SIRT3Q9NTG7 399 aaPredicted RBP14.25□□□□□ -0.13
VRK3-221ENST00000600284 CCM2LQ9NUG4 571 aaPredicted RBP14.25□□□□□ -0.13
VRK3-221ENST00000600284 NDRG3Q9UGV2 375 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 ZDHHC2Q9UIJ5 367 aa14.25□□□□□ -0.13
VRK3-221ENST00000600284 A0A1W2PQD3 144 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 H3BML4 177 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 SLU7O95391 586 aaKnown RBP14.24□□□□□ -0.13
VRK3-221ENST00000600284 ETV4P43268 484 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 DUSP5Q16690 384 aa14.24□□□□□ -0.13
VRK3-221ENST00000600284 LSM12Q3MHD2 195 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms