RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 A0A0G2JND7 137 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 OR14I1A6ND48 311 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 RFXANKO14593 260 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 GMFGO60234 142 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 ANGPTL1O95841 491 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 OR12D1P0DN82 309 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 ESRRAP11474 423 aaPredicted RBP13.84□□□□□ -0.19
LIG1-219ENST00000600055 TBXA2RP21731 343 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 CLK3P49761 638 aaKnown RBP13.84□□□□□ -0.19
LIG1-219ENST00000600055 RNF144AP50876 292 aaPredicted RBP13.84□□□□□ -0.19
LIG1-219ENST00000600055 PER3P56645 1201 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 ADORA2A-AS1P86434 159 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 GTDC1Q4AE62 458 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 CGB2Q6NT52 195 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 ZNF585AQ6P3V2 769 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 RPRMLQ8N4K4 120 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 FADS6Q8N9I5 356 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 OR2M3Q8NG83 312 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 OR4K17Q8NGC6 315 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 MIPOL1Q8TD10 442 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 RAB8BQ92930 207 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 PSMG3-AS1Q96PY0 264 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 SDF2Q99470 211 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 G6PC3Q9BUM1 346 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 OR2B2Q9GZK3 357 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 CCDC167Q9P0B6 97 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 RP1L1Q8IWN7 2480 aaPredicted RBP13.84□□□□□ -0.19
LIG1-219ENST00000600055 FLNCQ14315 2725 aa13.84□□□□□ -0.19
LIG1-219ENST00000600055 NUP214P35658 2090 aaPredicted RBP13.83□□□□□ -0.2
LIG1-219ENST00000600055 A1L4Q6 167 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 ALG1L2C9J202 215 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 BCKDKO14874 412 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 VIMP08670 466 aaKnown RBP13.83□□□□□ -0.2
LIG1-219ENST00000600055 NCF2P19878 526 aaPredicted RBP13.83□□□□□ -0.2
LIG1-219ENST00000600055 ATP6V1C1P21283 382 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 SRD5A2P31213 254 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 CRYZQ08257 329 aaKnown RBP13.83□□□□□ -0.2
LIG1-219ENST00000600055 LRRC74AQ0VAA2 488 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 AGKQ53H12 422 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 DCST1Q5T197 706 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 SLC2A7Q6PXP3 512 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 RNF130Q86XS8 419 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 MARVELD2Q8N4S9 558 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 CHDHQ8NE62 594 aaPredicted RBP13.83□□□□□ -0.2
LIG1-219ENST00000600055 OR14L1PQ8NHC6 308 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 PNPT1Q8TCS8 783 aaKnown RBP13.83□□□□□ -0.2
LIG1-219ENST00000600055 XAGE5Q8WWM1 108 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 STON2Q8WXE9 905 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 SARAFQ96BY9 339 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 DMRTA2Q96SC8 542 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 SDHAF3Q9NRP4 125 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 UBQLN4Q9NRR5 601 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 ALKBH4Q9NXW9 302 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 SUCOQ9UBS9 1254 aaKnown RBP13.83□□□□□ -0.2
LIG1-219ENST00000600055 DKKL1Q9UK85 242 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 RPH3AQ9Y2J0 694 aaPredicted RBP13.83□□□□□ -0.2
LIG1-219ENST00000600055 PCDHGB3Q9Y5G1 929 aa13.83□□□□□ -0.2
LIG1-219ENST00000600055 DUXAA6NLW8 204 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 E9PLN8 166 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 NR5A2O00482 541 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 NDUFB5O43674 189 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 ZIC3O60481 467 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 FCMRO60667 390 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 SOX30O94993 753 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 NGFRP08138 427 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 BMP7P18075 431 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 DPP4P27487 766 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 LCN1P31025 176 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 DCTP40126 519 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 MDH1P40925 334 aaKnown RBP13.82□□□□□ -0.2
LIG1-219ENST00000600055 KHKP50053 298 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 ATP4BP51164 291 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 FUT5Q11128 374 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 SQLEQ14534 574 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 CD226Q15762 336 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 FLYWCH1Q4VC44 716 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 COX20Q5RI15 118 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.82□□□□□ -0.2
LIG1-219ENST00000600055 WLSQ5T9L3 541 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 BLOC1S3Q6QNY0 202 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 MSANTD1Q6ZTZ1 278 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 TRIML2Q8N7C3 387 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 GTF2H4Q92759 462 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 AURKBQ96GD4 344 aaPredicted RBP13.82□□□□□ -0.2
LIG1-219ENST00000600055 ITCHQ96J02 903 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 TIMP4Q99727 224 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 KLHDC3Q9BQ90 382 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 VKORC1Q9BQB6 163 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 TMEM120AQ9BXJ8 343 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 UGT2B28Q9BY64 529 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 TP63Q9H3D4 680 aaPredicted RBP13.82□□□□□ -0.2
LIG1-219ENST00000600055 ZNF385DQ9H6B1 395 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 CCDC134Q9H6E4 229 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 RMND5AQ9H871 391 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 SLC52A3Q9NQ40 469 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 TAS2R10Q9NYW0 307 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 COL12A1Q99715 3063 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 HIVEP3Q5T1R4 2406 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 ZNF407Q9C0G0 2248 aa13.82□□□□□ -0.2
LIG1-219ENST00000600055 PRAMEF27A3QJZ7 478 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms