RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 INTS12Q96CB8 462 aaKnown RBP13.63□□□□□ -0.23
LIG1-215ENST00000597901 FAM120BQ96EK7 910 aaKnown RBP13.63□□□□□ -0.23
LIG1-215ENST00000597901 C1GALT1C1Q96EU7 318 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 PKNOX2Q96KN3 472 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 ZFP3Q96NJ6 502 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 PRPF18Q99633 342 aaKnown RBP13.63□□□□□ -0.23
LIG1-215ENST00000597901 C1orf50Q9BV19 199 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 SSU72Q9NP77 194 aaKnown RBP13.63□□□□□ -0.23
LIG1-215ENST00000597901 SIRT3Q9NTG7 399 aaPredicted RBP13.63□□□□□ -0.23
LIG1-215ENST00000597901 FBXO34Q9NWN3 711 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 CRIM1Q9NZV1 1036 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 CLCF1Q9UBD9 225 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 EIF3LQ9Y262 564 aaKnown RBP13.63□□□□□ -0.23
LIG1-215ENST00000597901 CSMD1Q96PZ7 3565 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 HCFC1P51610 2035 aa13.63□□□□□ -0.23
LIG1-215ENST00000597901 ADGRG4Q8IZF6 3080 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 OR2M5A3KFT3 312 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 LINC01387J3KSC0 135 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 CTAG2O75638 210 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 TGM6O95932 706 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 SERPINE1P05121 402 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 HMGN2P05204 90 aaKnown RBP13.62□□□□□ -0.23
LIG1-215ENST00000597901 FREM3P0C091 2139 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 G6PDP11413 515 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 POU3F2P20265 443 aaPredicted RBP13.62□□□□□ -0.23
LIG1-215ENST00000597901 PRPS1L1P21108 318 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 CCT3P49368 545 aaKnown RBP13.62□□□□□ -0.23
LIG1-215ENST00000597901 PRIM2P49643 509 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 SUCLG1P53597 346 aaKnown RBP13.62□□□□□ -0.23
LIG1-215ENST00000597901 EEF1A1P68104 462 aaKnown RBP13.62□□□□□ -0.23
LIG1-215ENST00000597901 EMX2Q04743 252 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 GANABQ14697 944 aaKnown RBP13.62□□□□□ -0.23
LIG1-215ENST00000597901 CHI3L2Q15782 390 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.62□□□□□ -0.23
LIG1-215ENST00000597901 LSM12Q3MHD2 195 aaKnown RBP13.62□□□□□ -0.23
LIG1-215ENST00000597901 TNFAIP8L3Q5GJ75 292 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 CEP85LQ5SZL2 805 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 EEF1A1P5Q5VTE0 462 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 RAET1LQ5VY80 246 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 CHMP1BQ7LBR1 199 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 ZAR1Q86SH2 424 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 TMEM200AQ86VY9 491 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 KIF18BQ86Y91 864 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 RIMKLAQ8IXN7 391 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 UBQLNLQ8IYU4 475 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 KRTCAP2Q8N6L1 136 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 GOT1L1Q8NHS2 421 aaPredicted RBP13.62□□□□□ -0.23
LIG1-215ENST00000597901 PSMA8Q8TAA3 256 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 FBXO30Q8TB52 745 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 MS4A4EQ96PG1 132 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 C20orf27Q9GZN8 174 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 CENPHQ9H3R5 247 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 KCNK9Q9NPC2 374 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 ZCCHC3Q9NUD5 404 aaKnown RBP13.62□□□□□ -0.23
LIG1-215ENST00000597901 ATAD3AQ9NVI7 634 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.62□□□□□ -0.23
LIG1-215ENST00000597901 SNX8Q9Y5X2 465 aa13.62□□□□□ -0.23
LIG1-215ENST00000597901 FAM221AA4D161 298 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 ALG1L2C9J202 215 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 TM9SF1O15321 606 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 HCRTR2O43614 444 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 NDUFB5O43674 189 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 GMFGO60234 142 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 OXSR1O95747 527 aaPredicted RBP13.61□□□□□ -0.23
LIG1-215ENST00000597901 TUBBP07437 444 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 NGFRP08138 427 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 DHRS4L1P0CG22 281 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 LCN1P31025 176 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 CLDN8P56748 225 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 EEFSECP57772 596 aaKnown RBP13.61□□□□□ -0.23
LIG1-215ENST00000597901 ABCE1P61221 599 aaKnown RBP13.61□□□□□ -0.23
LIG1-215ENST00000597901 GRAMD2AQ8IUY3 354 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 MEIOBQ8N635 442 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 ZNF781Q8N8C0 355 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 FAM222BQ8WU58 562 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 OTUB1Q96FW1 271 aaPredicted RBP13.61□□□□□ -0.23
LIG1-215ENST00000597901 ZIM3Q96PE6 472 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 PIGQQ9BRB3 760 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 SFXN3Q9BWM7 321 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 BTBD2Q9BX70 525 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 PIGUQ9H490 435 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 CXorf36Q9H7Y0 433 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 AKTIPQ9H8T0 292 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 UBQLN4Q9NRR5 601 aa13.61□□□□□ -0.23
LIG1-215ENST00000597901 DNAJB12Q9NXW2 375 aaKnown RBP13.61□□□□□ -0.23
LIG1-215ENST00000597901 EXPH5Q8NEV8 1989 aa13.6□□□□□ -0.23
LIG1-215ENST00000597901 TUBAL3A6NHL2 446 aa13.6□□□□□ -0.23
LIG1-215ENST00000597901 ESPNB1AK53 854 aa13.6□□□□□ -0.23
LIG1-215ENST00000597901 EEF1E1-BLOC1S5C9J1V9 151 aa13.6□□□□□ -0.23
LIG1-215ENST00000597901 H0YC42 278 aa13.6□□□□□ -0.23
LIG1-215ENST00000597901 EEF1E1O43324 174 aaKnown RBP13.6□□□□□ -0.23
LIG1-215ENST00000597901 TNFRSF21O75509 655 aa13.6□□□□□ -0.23
LIG1-215ENST00000597901 C6orf47O95873 294 aa13.6□□□□□ -0.23
LIG1-215ENST00000597901 MYZAPP0CAP1 466 aa13.6□□□□□ -0.23
LIG1-215ENST00000597901 SLC1A6P48664 564 aa13.6□□□□□ -0.23
LIG1-215ENST00000597901 RPL14P50914 215 aaKnown RBP13.6□□□□□ -0.23
LIG1-215ENST00000597901 TPD52P55327 224 aaPredicted RBP13.6□□□□□ -0.23
LIG1-215ENST00000597901 POU6F2P78424 691 aaPredicted RBP13.6□□□□□ -0.23
LIG1-215ENST00000597901 MAD2L1Q13257 205 aaPredicted RBP13.6□□□□□ -0.23
LIG1-215ENST00000597901 LASP1Q14847 261 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms