RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 OR4C3Q8NH37 302 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 SFXN5Q8TD22 340 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 DUSP19Q8WTR2 217 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 SLC9A6Q92581 669 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 MOAP1Q96BY2 351 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 RMND5BQ96G75 393 aaPredicted RBP11.84□□□□□ -0.51
USE1-207ENST00000596136 NUF2Q9BZD4 464 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 DSN1Q9H410 356 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 PIGUQ9H490 435 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 HHATLQ9HCP6 504 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 ZCCHC3Q9NUD5 404 aaKnown RBP11.84□□□□□ -0.51
USE1-207ENST00000596136 GPATCH2Q9NW75 528 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 PPP4R1LQ9P1A2 415 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 CAMK2AQ9UQM7 478 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 KIAA1549Q9HCM3 1950 aa11.84□□□□□ -0.51
USE1-207ENST00000596136 PDZD2O15018 2839 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 NKX2-6A6NCS4 301 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 MBD3L4A6NDZ8 208 aaPredicted RBP11.83□□□□□ -0.52
USE1-207ENST00000596136 MBD3L3A6NE82 208 aaPredicted RBP11.83□□□□□ -0.52
USE1-207ENST00000596136 MBD3L5A6NJ08 208 aaPredicted RBP11.83□□□□□ -0.52
USE1-207ENST00000596136 RNASET2O00584 256 aaKnown RBP11.83□□□□□ -0.52
USE1-207ENST00000596136 SCO2O43819 266 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 C6orf47O95873 294 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 ZNF708P17019 499 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 LBPP18428 481 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 CLDN18P56856 261 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 HBA1P69905 142 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 CASP8Q14790 479 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 GRAMD1BQ3KR37 738 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 GLYR1Q49A26 553 aaPredicted RBP11.83□□□□□ -0.52
USE1-207ENST00000596136 GDF7Q7Z4P5 450 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 MARCH3Q86UD3 253 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 NAXEQ8NCW5 288 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 TNIP2Q8NFZ5 429 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 OR4K17Q8NGC6 315 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 OR56A1Q8NGH5 318 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 MBD3L2Q8NHZ7 208 aaPredicted RBP11.83□□□□□ -0.52
USE1-207ENST00000596136 TESCQ96BS2 214 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 C14orf79Q96F83 325 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 PAIP2Q9BPZ3 127 aaKnown RBP11.83□□□□□ -0.52
USE1-207ENST00000596136 G6PC3Q9BUM1 346 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 BTBD2Q9BX70 525 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 ACTRT3Q9BYD9 372 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 ZNF629Q9UEG4 869 aaPredicted RBP11.83□□□□□ -0.52
USE1-207ENST00000596136 MED12LQ86YW9 2145 aa11.83□□□□□ -0.52
USE1-207ENST00000596136 A0A1W2PQD3 144 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 FAM90A27PA6NNH2 459 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 LINC01387J3KSC0 135 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 SDHDO14521 159 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 KLF11O14901 512 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 HDAC3O15379 428 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 OXSR1O95747 527 aaPredicted RBP11.82□□□□□ -0.52
USE1-207ENST00000596136 ANGPTL1O95841 491 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 IL2RAP01589 272 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 SNRPB2P08579 225 aaKnown RBP11.82□□□□□ -0.52
USE1-207ENST00000596136 KRT16P08779 473 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 PHC1P78364 1004 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 POU6F2P78424 691 aaPredicted RBP11.82□□□□□ -0.52
USE1-207ENST00000596136 OCRLQ01968 901 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 LASP1Q14847 261 aaKnown RBP11.82□□□□□ -0.52
USE1-207ENST00000596136 DPY19L1Q2PZI1 675 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 TMEM44Q2T9K0 475 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 AGBL2Q5U5Z8 902 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 ATG16L1Q676U5 607 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 FIGNL1Q6PIW4 674 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 MEX3BQ6ZN04 569 aaKnown RBP11.82□□□□□ -0.52
USE1-207ENST00000596136 ZAR1Q86SH2 424 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 DMRTC2Q8IXT2 367 aaPredicted RBP11.82□□□□□ -0.52
USE1-207ENST00000596136 C1GALT1C1Q96EU7 318 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 PPP1R36Q96LQ0 422 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 SFXN2Q96NB2 322 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 TUBA1CQ9BQE3 449 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 YIPF4Q9BSR8 244 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 TBL1XR1Q9BZK7 514 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 DPY30Q9C005 99 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 PTGES2Q9H7Z7 377 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 UBQLN4Q9NRR5 601 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 FBXO34Q9NWN3 711 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 NKIRAS1Q9NYS0 192 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 MED11Q9P086 117 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 DKKL1Q9UK85 242 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 SNX8Q9Y5X2 465 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 MYO9AB2RTY4 2548 aa11.82□□□□□ -0.52
USE1-207ENST00000596136 ANKHD1Q8IWZ3 2542 aaKnown RBP11.82□□□□□ -0.52
USE1-207ENST00000596136 PRSS51A0A1B0GVH4 220 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 SLCO1B7G3V0H7 640 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 SYT5O00445 386 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 ALDOCP09972 364 aaKnown RBP11.81□□□□□ -0.52
USE1-207ENST00000596136 SSTR2P30874 369 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 RFX3P48380 749 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 STARP49675 285 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 ZNF136P52737 540 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 TP53BP2Q13625 1128 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 RCAN2Q14206 197 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 PGS1Q32NB8 556 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 FBXL19-AS1Q494R0 122 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 AP1ARQ63HQ0 302 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 OR4F3Q6IEY1 312 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 BHLHB9Q6PI77 547 aa11.81□□□□□ -0.52
USE1-207ENST00000596136 SZRD1Q7Z422 152 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms