RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CES1P1Q9UKY3 287 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 ZFR2Q9UPR6 939 aaKnown RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 GPR55Q9Y2T6 319 aaPredicted RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 CHST2Q9Y4C5 530 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 PCYT1BQ9Y5K3 369 aaPredicted RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 EDDM13A0A1B0GTR0 161 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 FABP7O15540 132 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 FGF18O76093 207 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 PEPDP12955 493 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 F3P13726 295 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 PAICSP22234 425 aaKnown RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 HIST1H1TP22492 207 aaPredicted RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 TRHRP34981 398 aaPredicted RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 BTCP35070 178 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 METAP1P53582 386 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 PER3P56645 1201 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 RGS8P57771 180 aaPredicted RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 FCN2Q15485 313 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 C6orf132Q5T0Z8 1188 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 C9orf64Q5T6V5 341 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 PIP5KL1Q5T9C9 394 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 FAM205BPQ63HN1 556 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 SLC48A1Q6P1K1 146 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 NIPAL3Q6P499 406 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 AMIGO1Q86WK6 493 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 NR2C2APQ86WQ0 139 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 MEX3DQ86XN8 651 aaKnown RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 VRK2Q86Y07 508 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 CPOQ8IVL8 374 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 NKAIN4Q8IVV8 208 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 GPALPP1Q8IXQ4 340 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 SIRT6Q8N6T7 355 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 ZNF366Q8N895 744 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 HGDQ93099 445 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 VWCEQ96DN2 955 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 C16orf58Q96GQ5 468 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 MCHR1Q99705 422 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 ALG8Q9BVK2 526 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 RAB11FIP5Q9BXF6 653 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 C1QTNF2Q9BXJ5 285 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 ACTRT3Q9BYD9 372 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 PRDM7Q9NQW5 492 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 ACSL5Q9ULC5 683 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 TMA7Q9Y2S6 64 aaKnown RBP12.37□□□□□ -0.43
VRK3-209ENST00000594948 KCNE3Q9Y6H6 103 aa12.37□□□□□ -0.43
VRK3-209ENST00000594948 PTPRSQ13332 1948 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 A0A1W2PR48 441 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 DUXAA6NLW8 204 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 GPR89AB7ZAQ6 455 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 SOCS6O14544 535 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 PLPP2O43688 288 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 ERAL1O75616 437 aaKnown RBP12.36□□□□□ -0.43
VRK3-209ENST00000594948 SLC22A5O76082 557 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 CXCL14O95715 111 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 CH25HO95992 272 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 PAHP00439 452 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 EIF4EP06730 217 aaKnown RBP12.36□□□□□ -0.43
VRK3-209ENST00000594948 TPOP07202 933 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 SLC35G4P0C7Q5 338 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 GPR89BP0CG08 455 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 ANXA3P12429 323 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 MPIP34949 423 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 AHRP35869 848 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 GALEQ14376 348 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 LRRC32Q14392 662 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 DHCR24Q15392 516 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 COL28A1Q2UY09 1125 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 HNRNPA1L2Q32P51 320 aaKnown RBP12.36□□□□□ -0.43
VRK3-209ENST00000594948 RPL13AP3Q6NVV1 102 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 ABHD17CQ6PCB6 329 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 BAIAP2L2Q6UXY1 529 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 NRMQ8IXM6 262 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 CCDC116Q8IYX3 515 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 LINC01555Q8NAE3 123 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 SRFBP1Q8NEF9 429 aaKnown RBP12.36□□□□□ -0.43
VRK3-209ENST00000594948 BBS1Q8NFJ9 593 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 ZNF431Q8TF32 576 aaPredicted RBP12.36□□□□□ -0.43
VRK3-209ENST00000594948 RAB7BQ96AH8 199 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 MS4A6EQ96DS6 147 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 ELP4Q96EB1 424 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 SARGQ9BW04 601 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 UBQLN3Q9H347 655 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 POLMQ9NP87 494 aaPredicted RBP12.36□□□□□ -0.43
VRK3-209ENST00000594948 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
VRK3-209ENST00000594948 EIF3KQ9UBQ5 218 aaKnown RBP12.36□□□□□ -0.43
VRK3-209ENST00000594948 RABL2BQ9UNT1 228 aa12.36□□□□□ -0.43
VRK3-209ENST00000594948 A0A1B0GVI7 797 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 ANKRD61A6NGH8 418 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 SMLR1H3BR10 107 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 PGRMC2O15173 223 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 SOX30O94993 753 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 ADH5P11766 374 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 ATP5A1P25705 553 aaKnown RBP12.35□□□□□ -0.43
VRK3-209ENST00000594948 GPR4P46093 362 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 GCGRP47871 477 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 ELAVL3Q14576 367 aaKnown RBP12.35□□□□□ -0.43
VRK3-209ENST00000594948 INSL4Q14641 139 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 NTRK2Q16620 822 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 SFXN4Q6P4A7 337 aa12.35□□□□□ -0.43
VRK3-209ENST00000594948 TEX261Q6UWH6 196 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms