RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 HHATQ5VTY9 493 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 RAET1LQ5VY80 246 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 GALNT10Q86SR1 603 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 COX18Q8N8Q8 333 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 PSMA8Q8TAA3 256 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 COQ8BQ96D53 544 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 YIPF4Q9BSR8 244 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 G6PC3Q9BUM1 346 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 C20orf27Q9GZN8 174 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 AKTIPQ9H8T0 292 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 NEUROD4Q9HD90 331 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 ASIC5Q9NY37 505 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 KCNN3Q9UGI6 736 aa13.84□□□□□ -0.19
TRIM28-203ENST00000593582 CLCA1A8K7I4 914 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 LINC01387J3KSC0 135 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 SYT5O00445 386 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 ANGPTL1O95841 491 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 NGFRP08138 427 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 HPGDP15428 266 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 ZNF708P17019 499 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 CAPN3P20807 821 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 TBXA2RP21731 343 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 CTSSP25774 331 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 LCN1P31025 176 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 UQCRC1P31930 480 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 OPRM1P35372 400 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 PEX19P40855 299 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 CCT3P49368 545 aaKnown RBP13.83□□□□□ -0.2
TRIM28-203ENST00000593582 ASCL1P50553 236 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 ZNF136P52737 540 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 CLDN8P56748 225 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 CLDN18P56856 261 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 C21orf58P58505 322 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 MYBPHQ13203 477 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 TP53BP2Q13625 1128 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 LASP1Q14847 261 aaKnown RBP13.83□□□□□ -0.2
TRIM28-203ENST00000593582 BCL2A1Q16548 175 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRIM28-203ENST00000593582 PGS1Q32NB8 556 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 FIGNL1Q6PIW4 674 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 LURAP1LQ8IV03 231 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 RIMKLAQ8IXN7 391 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 RELL2Q8NC24 303 aaPredicted RBP13.83□□□□□ -0.2
TRIM28-203ENST00000593582 OR56A1Q8NGH5 318 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 C1GALT1C1Q96EU7 318 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 ZFP3Q96NJ6 502 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 UCN2Q96RP3 112 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 STACQ99469 402 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 SORT1Q99523 831 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 TM9SF2Q99805 663 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 ZNF559Q9BR84 538 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 DUSP26Q9BV47 211 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 BTBD2Q9BX70 525 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 RTN4RQ9BZR6 473 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 DUSP22Q9NRW4 184 aa13.83□□□□□ -0.2
TRIM28-203ENST00000593582 FAF1Q9UNN5 650 aaPredicted RBP13.83□□□□□ -0.2
TRIM28-203ENST00000593582 HCFC1P51610 2035 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 IGLV3-32A0A0A0MS00 114 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 ALG1L2C9J202 215 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 CFLARO15519 480 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 NDUFB5O43674 189 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 SOX30O94993 753 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 OXSR1O95747 527 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-203ENST00000593582 C6orf47O95873 294 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 IL18BPO95998 194 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 KRT16P08779 473 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 TMIGD3P0DMS9 266 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-203ENST00000593582 PEPDP12955 493 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 POU3F2P20265 443 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-203ENST00000593582 DLX5P56178 289 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 B3GALT5-AS1P59052 145 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 POU6F2P78424 691 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-203ENST00000593582 EXOSC6Q5RKV6 272 aaKnown RBP13.82□□□□□ -0.2
TRIM28-203ENST00000593582 BHLHB9Q6PI77 547 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 ARSKQ6UWY0 536 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 APOOLQ6UXV4 268 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 CHMP1BQ7LBR1 199 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 CAMKMTQ7Z624 323 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 ADGRE4PQ86SQ3 457 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 ANKRD42Q8N9B4 389 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 C9orf106Q8NAJ2 232 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 OR4C3Q8NH37 302 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 GOT1L1Q8NHS2 421 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-203ENST00000593582 FAM110BQ8TC76 370 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 NUDT8Q8WV74 236 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 WNT2BQ93097 391 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 MOAP1Q96BY2 351 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 OTUB1Q96FW1 271 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-203ENST00000593582 PIGQQ9BRB3 760 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 ACTRT3Q9BYD9 372 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 ACBD3Q9H3P7 528 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 CXorf36Q9H7Y0 433 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 UBQLN4Q9NRR5 601 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 GIN1Q9NXP7 522 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 HAO1Q9UJM8 370 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 FOXD3Q9UJU5 478 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-203ENST00000593582 L3MBTL1Q9Y468 752 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 PDZD2O15018 2839 aa13.82□□□□□ -0.2
TRIM28-203ENST00000593582 INTS1Q8N201 2190 aaKnown RBP13.81□□□□□ -0.2
TRIM28-203ENST00000593582 TMEM120BA0PK00 339 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms