RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 GPN3Q9UHW5 284 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 FBXW2Q9UKT8 454 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MED16Q9Y2X0 877 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PPIL1Q9Y3C6 166 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ETV7Q9Y603 341 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 A0A0X1KG70 313 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ABHD14A-ACY1A0A1B0GW23 586 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 A8MU76 341 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 XKRYO14609 159 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CDC40O60508 579 aaKnown RBP eCLIP3.33□□□□□ -1.88
VMP1-216ENST00000592790 FZD7O75084 574 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TFP02787 698 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SEMG1P04279 462 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TCRBP04435 133 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PPP3CBP16298 524 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TNFRSF1BP20333 461 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 NPR2P20594 1047 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 IMPA1P29218 277 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MLLT10P55197 1068 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 RPS25P62851 125 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ADAM8P78325 824 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SP3Q02447 781 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ACSM1Q08AH1 577 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZNF155Q12901 538 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 GBX1Q14549 363 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PUM1Q14671 1186 aaKnown RBP eCLIP3.33□□□□□ -1.88
VMP1-216ENST00000592790 PLEKHN1Q494U1 663 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 CCDC58Q4VC31 144 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 RTP2Q5QGT7 225 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 C1orf94Q6P1W5 598 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 RPL22L1Q6P5R6 122 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 MBOAT2Q6ZWT7 520 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 VASH1Q7L8A9 365 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 TMEM173Q86WV6 379 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 APCDD1Q8J025 514 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 LRRC25Q8N386 305 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 PNPLA1Q8N8W4 532 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZNF527Q8NB42 609 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZNF248Q8NDW4 579 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 OR4K14Q8NGD5 310 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 BRIX1Q8TDN6 353 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZNF480Q8WV37 535 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TM9SF4Q92544 642 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 IRF7Q92985 503 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 WDR34Q96EX3 536 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZNF419Q96HQ0 510 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZNF578Q96N58 590 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZIC5Q96T25 663 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TREX2Q9BQ50 279 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ARHGAP9Q9BRR9 750 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 GSX2Q9BZM3 304 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 POLMQ9NP87 494 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 TLR9Q9NR96 1032 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 NDRG2Q9UN36 371 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ASB1Q9Y576 335 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 A0A0D9SG52 128 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 LOC102723532A0A0G2JNH3 316 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 WASH3PC4AMC7 463 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 GTPBP1O00178 669 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 FABP7O15540 132 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 MTX2O75431 263 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 LEFTY1O75610 366 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 GIPP09681 153 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 C1SP09871 688 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SPNP16150 400 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SYN1P17600 705 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 PSMB1P20618 241 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 AHCYP23526 432 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ACADLP28330 430 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CD6P30203 668 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 AHRP35869 848 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CRYBB2P43320 205 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 RFX3P48380 749 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 RPS15AP62244 130 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 SNRPD2P62316 118 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 GAB1Q13480 694 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 PIN1Q13526 163 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 CCINQ13939 588 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 ZNF234Q14588 700 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 AMZ1Q400G9 498 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TXNDC8Q6A555 127 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SLC25A25Q6KCM7 469 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SFXN4Q6P4A7 337 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CNKSR3Q6P9H4 555 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SMARCD3Q6STE5 483 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 Q6ZPB1 254 aaPredicted RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 RFPL4BQ6ZWI9 263 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CHMP1BQ7LBR1 199 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 OVCH1Q7RTY7 1134 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 HORMAD2Q8N7B1 307 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TMEM145Q8NBT3 493 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 OR2L2Q8NH16 312 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 POF1BQ8WVV4 589 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 TSEN15Q8WW01 171 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 RBPMSQ93062 196 aaKnown RBP3.32□□□□□ -1.88
VMP1-216ENST00000592790 KATNB1Q9BVA0 655 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 CHIAQ9BZP6 476 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 B3GNT4Q9C0J1 378 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 SPNS1Q9H2V7 528 aa3.32□□□□□ -1.88
VMP1-216ENST00000592790 EXO5Q9H790 373 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms