RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 TRIML2Q8N7C3 387 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 SIMC1Q8NDZ2 872 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 NUP43Q8NFH3 380 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 OR4A15Q8NGL6 344 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 NEIL3Q8TAT5 605 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 HOXB13Q92826 284 aaPredicted RBP16.4■□□□□ 0.22
VAT1-208ENST00000590924 SPDL1Q96EA4 605 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 FAM120BQ96EK7 910 aaKnown RBP16.4■□□□□ 0.22
VAT1-208ENST00000590924 ITCHQ96J02 903 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 LCORQ96JN0 433 aaPredicted RBP16.4■□□□□ 0.22
VAT1-208ENST00000590924 ZNF597Q96LX8 424 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 VSTM2LQ96N03 204 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 BTBD9Q96Q07 612 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 DOHHQ9BU89 302 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 B4GALT7Q9UBV7 327 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 ARL2BPQ9Y2Y0 163 aa16.4■□□□□ 0.22
VAT1-208ENST00000590924 A0A1W2PP18 115 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 C9JVG2 144 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 TO15178 435 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 NAGAP17050 411 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 VPS26BQ4G0F5 336 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 RIPPLY2Q5TAB7 128 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 ANKRD46Q86W74 232 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 LIX1LQ8IVB5 337 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 ANKS4BQ8N8V4 417 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 CDRT4Q8N9R6 151 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 VPS33AQ96AX1 596 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 MS4A4EQ96PG1 132 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 PANX1Q96RD7 426 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 LMF2Q9BU23 707 aaKnown RBP16.39■□□□□ 0.21
VAT1-208ENST00000590924 SLC6A15Q9H2J7 730 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 ANKRA2Q9H9E1 313 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 FOLH1BQ9HBA9 442 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 SERHLQ9NQF3 203 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 ZCCHC3Q9NUD5 404 aaKnown RBP16.39■□□□□ 0.21
VAT1-208ENST00000590924 GIN1Q9NXP7 522 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 SNX8Q9Y5X2 465 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 MED12LQ86YW9 2145 aa16.39■□□□□ 0.21
VAT1-208ENST00000590924 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 FRG2CA6NGY1 282 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 RFXANKO14593 260 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 TP53I11O14683 189 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 TRIM3O75382 744 aaPredicted RBP16.38■□□□□ 0.21
VAT1-208ENST00000590924 ERN1O75460 977 aaKnown RBP16.38■□□□□ 0.21
VAT1-208ENST00000590924 CPSF4O95639 269 aaKnown RBP16.38■□□□□ 0.21
VAT1-208ENST00000590924 ABCB1P08183 1280 aaPredicted RBP16.38■□□□□ 0.21
VAT1-208ENST00000590924 KRT16P08779 473 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 MAP3K8P41279 467 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 PRIM2P49643 509 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 TMED10P49755 219 aaKnown RBP16.38■□□□□ 0.21
VAT1-208ENST00000590924 NRG3P56975 720 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 KLF10Q13118 480 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 MYBPHQ13203 477 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 MAPRE2Q15555 327 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 ZNHIT3Q15649 155 aaPredicted RBP16.38■□□□□ 0.21
VAT1-208ENST00000590924 SPDYE7PQ495Y7 208 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 TIGD2Q4W5G0 525 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 EXOSC6Q5RKV6 272 aaKnown RBP16.38■□□□□ 0.21
VAT1-208ENST00000590924 ULK2Q8IYT8 1036 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 GTF2H4Q92759 462 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 DIO2Q92813 273 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 GIMAP5Q96F15 307 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 JSRP1Q96MG2 331 aaPredicted RBP16.38■□□□□ 0.21
VAT1-208ENST00000590924 SECISBP2Q96T21 854 aaKnown RBP16.38■□□□□ 0.21
VAT1-208ENST00000590924 ITPAQ9BY32 194 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 NMUR2Q9GZQ4 415 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 ALKBH4Q9NXW9 302 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 DTX4Q9Y2E6 619 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 L3MBTL1Q9Y468 752 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 NPFFR2Q9Y5X5 522 aa16.38■□□□□ 0.21
VAT1-208ENST00000590924 NR5A2O00482 541 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 CT45A8P0DMV1 189 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 CT45A9P0DMV2 189 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 GDF1P27539 372 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 MAGEA8P43361 318 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 PRKAG1P54619 331 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 DLX5P56178 289 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 TXNL4AP83876 142 aaKnown RBP16.37■□□□□ 0.21
VAT1-208ENST00000590924 CYP27C1Q4G0S4 372 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 CT45A2Q5DJT8 189 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 GKAP1Q5VSY0 366 aaPredicted RBP16.37■□□□□ 0.21
VAT1-208ENST00000590924 MFSD12Q6NUT3 480 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 C6orf120Q7Z4R8 191 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 TMEM200AQ86VY9 491 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 SPPL2AQ8TCT8 520 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 NXF5Q9H1B4 397 aaKnown RBP16.37■□□□□ 0.21
VAT1-208ENST00000590924 MYLK2Q9H1R3 596 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 LEF1Q9UJU2 399 aaPredicted RBP16.37■□□□□ 0.21
VAT1-208ENST00000590924 NDUFAF1Q9Y375 327 aa16.37■□□□□ 0.21
VAT1-208ENST00000590924 PRRC2AP48634 2157 aaKnown RBP16.37■□□□□ 0.21
VAT1-208ENST00000590924 NKX2-2O95096 273 aa16.36■□□□□ 0.21
VAT1-208ENST00000590924 SNX4O95219 450 aa16.36■□□□□ 0.21
VAT1-208ENST00000590924 HMGN2P05204 90 aaKnown RBP16.36■□□□□ 0.21
VAT1-208ENST00000590924 FBXW4P57775 412 aa16.36■□□□□ 0.21
VAT1-208ENST00000590924 PSG6Q00889 435 aa16.36■□□□□ 0.21
VAT1-208ENST00000590924 CRYZQ08257 329 aaKnown RBP16.36■□□□□ 0.21
VAT1-208ENST00000590924 COQ5Q5HYK3 327 aa16.36■□□□□ 0.21
VAT1-208ENST00000590924 ZNF621Q6ZSS3 439 aa16.36■□□□□ 0.21
VAT1-208ENST00000590924 SEM1Q6ZVN7 128 aa16.36■□□□□ 0.21
VAT1-208ENST00000590924 WDR53Q7Z5U6 358 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms