RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 ANKRD53Q8N9V6 530 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 ACVR1CQ8NER5 493 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 PCNPQ8WW12 178 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 UBXN10Q96LJ8 280 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 PKMYT1Q99640 499 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 ACPTQ9BZG2 426 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 PLAGL1Q9UM63 463 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 HRH3Q9Y5N1 445 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 GSRP00390 522 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 EGFP01133 1207 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 HSD11B2P80365 405 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 MAP4K2Q12851 820 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 STK11Q15831 433 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 OR4K13Q8NH42 304 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 GIMAP5Q96F15 307 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 C16orf58Q96GQ5 468 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 HRH4Q9H3N8 390 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 NELFAQ9H3P2 528 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 ERVMER34-1Q9H9K5 563 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 ARNT2Q9HBZ2 717 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 CFAP20Q9Y6A4 193 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 FAM230AA0A1W2PPH8 454 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 ZNF705GA8MUZ8 300 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 SMLR1H3BR10 107 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 M0R3H8 397 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 OR7A17O14581 309 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 STATHP02808 62 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 JUNDP17535 347 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 NAT1P18440 290 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 VITQ6UXI7 678 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 GPRIN1Q7Z2K8 1008 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 GLB1L2Q8IW92 636 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 MCEMP1Q8IX19 187 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 LRRC25Q8N386 305 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 GPR148Q8TDV2 347 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 ZNF689Q96CS4 500 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 LRRC46Q96FV0 321 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 SAMD11Q96NU1 681 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 F2RL3Q96RI0 385 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 PCYT2Q99447 389 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 PDLIM7Q9NR12 457 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 SMCO4Q9NRQ5 59 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 CNIH4Q9P003 139 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 PPP4R1LQ9P1A2 415 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 OSGIN1Q9UJX0 560 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 DIMT1Q9UNQ2 313 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 CORINQ9Y5Q5 1042 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 CSNK1G3Q9Y6M4 447 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 A0A0U1RQF3 1178 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 CDHR4A6H8M9 788 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 HOXC11O43248 304 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 FADS1O60427 444 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 RPL17P18621 184 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 GABRA3P34903 492 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 PIGAP37287 484 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 CCL23P55773 120 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 SLC35A2P78381 396 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 IL13RA1P78552 427 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 GPR17Q13304 367 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 RNF208Q9H0X6 261 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 PTPN2P17706 415 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 HTR3AP46098 478 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 RPS25P62851 125 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 NKX3-2P78367 333 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 HTR4Q13639 388 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 CLPPQ16740 277 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 NKPD1Q17RQ9 610 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 SLC18B1Q6NT16 456 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 PNO1Q9NRX1 252 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 USP22Q9UPT9 525 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 MN1Q10571 1320 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 PEX10O60683 326 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 CSTAP01040 98 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 TP53P04637 393 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 GRPRP30550 384 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 KDM4DQ6B0I6 523 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 OR4C11Q6IEV9 310 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 HMGN2P46Q86SG4 172 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 ZNF440Q8IYI8 595 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 SH3RF2Q8TEC5 729 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 OR2M4Q96R27 311 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 YIPF1Q9Y548 306 aa13.81□□□□□ -0.2
SMARCA4-214ENST00000589677 ADAMTSL3P82987 1691 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 A0A1B0GV50 99 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 ADAM10O14672 748 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 ZDHHC11BP0C7U3 371 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 ZNF8P17098 575 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 GIPRP48546 466 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 PPA1Q15181 289 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 FAM83HQ6ZRV2 1179 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 Q6ZVL8 140 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 MEPCEQ7L2J0 689 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 VASH1Q7L8A9 365 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 LMF1Q96S06 567 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 PARPBPQ9NWS1 579 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 LUZP4Q9P127 313 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 WASF3Q9UPY6 502 aa13.8□□□□□ -0.2
SMARCA4-214ENST00000589677 TUBAL3A6NHL2 446 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms