RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 UGT2B17O75795 530 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 DIRAS1O95057 198 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 PRSS23O95084 383 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 CAPNS1P04632 268 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 NRG3P56975 720 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 MAPK14Q16539 360 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 ST3GAL2Q16842 350 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 IGF2-ASQ6U949 168 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 PPP1R32Q7Z5V6 425 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 IL22RA1Q8N6P7 574 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 NACC2Q96BF6 587 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 EFHD2Q96C19 240 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-209ENST00000588857 ZNF300Q96RE9 604 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-209ENST00000588857 LMF1Q96S06 567 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 CIB1Q99828 191 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 AMBRA1Q9C0C7 1298 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 NTN4Q9HB63 628 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 PCDHGA10Q9Y5H3 936 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 ENPP4Q9Y6X5 453 aa20.55■□□□□ 0.88
ATG4D-209ENST00000588857 NSG1A0A0A6YYJ2 146 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 CENPVL1A0A0U1RR11 272 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 LOC101059948A0A1B0GTJ6 334 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 PEX1O43933 1283 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 E2F6O75461 281 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 REM1O75628 298 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 NID1P14543 1247 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 ZNF23P17027 643 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 IL12BP29460 328 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 DCTP40126 519 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 ATP12AP54707 1039 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 PLCXD2Q0VAA5 305 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 IQCCQ4KMZ1 466 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 ZNF836Q6ZNA1 936 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 CYP4Z1Q86W10 505 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 PRR22Q8IZ63 422 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 SLC34A3Q8N130 599 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 AMER2Q8N7J2 671 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 DIO2Q92813 273 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 NKD1Q969G9 470 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 IMMP1LQ96LU5 166 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 DEFB126Q9BYW3 111 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 HOXD1Q9GZZ0 328 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 VCXQ9H320 206 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 ASCL3Q9NQ33 180 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 KCNE5Q9UJ90 142 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 OAZ3Q9UMX2 235 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 DTNAQ9Y4J8 743 aa20.54■□□□□ 0.88
ATG4D-209ENST00000588857 A0A1W2PQ72 361 aa20.53■□□□□ 0.88
ATG4D-209ENST00000588857 M0R3H8 397 aa20.53■□□□□ 0.88
ATG4D-209ENST00000588857 TERTO14746 1132 aaKnown RBP20.53■□□□□ 0.88
ATG4D-209ENST00000588857 PDZK1Q5T2W1 519 aa20.53■□□□□ 0.88
ATG4D-209ENST00000588857 PLAG1Q6DJT9 500 aa20.53■□□□□ 0.88
ATG4D-209ENST00000588857 TSEN54Q7Z6J9 526 aaKnown RBP20.53■□□□□ 0.88
ATG4D-209ENST00000588857 COMTD1Q86VU5 262 aa20.53■□□□□ 0.88
ATG4D-209ENST00000588857 CLIP4Q8N3C7 705 aa20.53■□□□□ 0.88
ATG4D-209ENST00000588857 ZNF614Q8N883 585 aa20.53■□□□□ 0.88
ATG4D-209ENST00000588857 M1APQ8TC57 530 aa20.53■□□□□ 0.88
ATG4D-209ENST00000588857 THAP3Q8WTV1 239 aaPredicted RBP20.53■□□□□ 0.88
ATG4D-209ENST00000588857 C9orf16Q9BUW7 83 aa20.53■□□□□ 0.88
ATG4D-209ENST00000588857 REEP1Q9H902 201 aa20.53■□□□□ 0.88
ATG4D-209ENST00000588857 LIN28AQ9H9Z2 209 aaKnown RBP20.53■□□□□ 0.88
ATG4D-209ENST00000588857 MAP1BP46821 2468 aaKnown RBP20.52■□□□□ 0.88
ATG4D-209ENST00000588857 ADAMDEC1O15204 470 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 EPPINO95925 133 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 RHCEP18577 417 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 F8A1P23610 371 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 ABCD3P28288 659 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 LCN1P31025 176 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 YAP1P46937 504 aaKnown RBP20.52■□□□□ 0.88
ATG4D-209ENST00000588857 EEF1A1P68104 462 aaKnown RBP20.52■□□□□ 0.88
ATG4D-209ENST00000588857 ZNF141Q15928 474 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 DEF8Q6ZN54 512 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 ZBTB49Q6ZSB9 765 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 TAGAPQ8N103 731 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 ELP5Q8TE02 316 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 ZCCHC14Q8WYQ9 949 aaKnown RBP20.52■□□□□ 0.88
ATG4D-209ENST00000588857 KIAA1143Q96AT1 154 aaPredicted RBP20.52■□□□□ 0.88
ATG4D-209ENST00000588857 SDCCAG3Q96C92 435 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 OMA1Q96E52 524 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 ADOQ96SZ5 270 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 PIP5K1AQ99755 562 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 ARHGDIGQ99819 225 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 ZNF160Q9HCG1 818 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 UBQLN4Q9NRR5 601 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 RLIMQ9NVW2 624 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 PCDHGA6Q9Y5G7 932 aa20.52■□□□□ 0.88
ATG4D-209ENST00000588857 CLDN24A6NM45 220 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 NPIPB9F8W1W9 429 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 HS6ST1O60243 411 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 DPM1O60762 260 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 DNAJB5O75953 348 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 HPGDP15428 266 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 ARHGDIAP52565 204 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 NRF1Q16656 503 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 RNF220Q5VTB9 566 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 RAB43Q86YS6 212 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 ZDHHC13Q8IUH4 622 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 SVOPLQ8N434 492 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 ZNF527Q8NB42 609 aa20.51■□□□□ 0.87
ATG4D-209ENST00000588857 OR4D11Q8NGI4 311 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms