RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 PIGUQ9H490 435 aa13.48□□□□□ -0.25
ATG4D-207ENST00000587256 PTGES2Q9H7Z7 377 aa13.48□□□□□ -0.25
ATG4D-207ENST00000587256 INTS9Q9NV88 658 aaKnown RBP13.48□□□□□ -0.25
ATG4D-207ENST00000587256 GPATCH2Q9NW75 528 aa13.48□□□□□ -0.25
ATG4D-207ENST00000587256 RNF6Q9Y252 685 aa13.48□□□□□ -0.25
ATG4D-207ENST00000587256 PCDHGB3Q9Y5G1 929 aa13.48□□□□□ -0.25
ATG4D-207ENST00000587256 USH1CQ9Y6N9 552 aa13.48□□□□□ -0.25
ATG4D-207ENST00000587256 PRSS51A0A1B0GVH4 220 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 FAM90A27PA6NNH2 459 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 OXSR1O95747 527 aaPredicted RBP13.47□□□□□ -0.25
ATG4D-207ENST00000587256 ANGPTL1O95841 491 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 ACTL6AO96019 429 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 HOXD4P09016 255 aaPredicted RBP13.47□□□□□ -0.25
ATG4D-207ENST00000587256 GLI4P10075 376 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 CHRNB4P30926 498 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 DSCR4P56555 118 aaPredicted RBP13.47□□□□□ -0.25
ATG4D-207ENST00000587256 UFM1P61960 85 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 CDSNQ15517 529 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 ACSF3Q4G176 576 aaPredicted RBP13.47□□□□□ -0.25
ATG4D-207ENST00000587256 NHSL2Q5HYW2 709 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 EXOSC6Q5RKV6 272 aaKnown RBP13.47□□□□□ -0.25
ATG4D-207ENST00000587256 DCST2Q5T1A1 773 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 RAET1LQ5VY80 246 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 VASNQ6EMK4 673 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 RTL6Q6ICC9 239 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 ENPP6Q6UWR7 440 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 ZAR1Q86SH2 424 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 CCDC71Q8IV32 467 aaPredicted RBP13.47□□□□□ -0.25
ATG4D-207ENST00000587256 CLEC4FQ8N1N0 589 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 GATSQ8NAP1 163 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 OR2M3Q8NG83 312 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 ACTRT2Q8TDY3 377 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 MAELQ96JY0 434 aaKnown RBP13.47□□□□□ -0.25
ATG4D-207ENST00000587256 PRDM14Q9GZV8 571 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 SLCO1B3Q9NPD5 702 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 CHST11Q9NPF2 352 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 GIN1Q9NXP7 522 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 MED11Q9P086 117 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 RPH3AQ9Y2J0 694 aaPredicted RBP13.47□□□□□ -0.25
ATG4D-207ENST00000587256 GPR45Q9Y5Y3 372 aa13.47□□□□□ -0.25
ATG4D-207ENST00000587256 FAM47E-STBD1D6RA91 191 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 H0Y3Z8 333 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 SCDO00767 359 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 POLR3GO15318 223 aaPredicted RBP13.46□□□□□ -0.25
ATG4D-207ENST00000587256 NDUFB5O43674 189 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 GMFGO60234 142 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 SASH3O75995 380 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 NGFRP08138 427 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 HK1P19367 917 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 GRNP28799 593 aaKnown RBP13.46□□□□□ -0.25
ATG4D-207ENST00000587256 LCN1P31025 176 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 CHI3L1P36222 383 aaPredicted RBP13.46□□□□□ -0.25
ATG4D-207ENST00000587256 DGKQP52824 942 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 C17orf67Q0P5P2 114 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 GANABQ14697 944 aaKnown RBP13.46□□□□□ -0.25
ATG4D-207ENST00000587256 SF3B4Q15427 424 aaKnown RBP eCLIP13.46□□□□□ -0.251e-7■■■■□ 20.4
ATG4D-207ENST00000587256 ZNF630Q2M218 657 aaPredicted RBP13.46□□□□□ -0.25
ATG4D-207ENST00000587256 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
ATG4D-207ENST00000587256 AAGABQ6PD74 315 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 C6orf120Q7Z4R8 191 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 FADS6Q8N9I5 356 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 OR5D16Q8NGK9 328 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 FAM110BQ8TC76 370 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 DUSP19Q8WTR2 217 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 TEX37Q96LM6 180 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 OR7D2Q96RA2 312 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 OR52B2Q96RD2 323 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 RTN4RQ9BZR6 473 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 HHATLQ9HCP6 504 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 UBQLN4Q9NRR5 601 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 FBXO34Q9NWN3 711 aa13.46□□□□□ -0.25
ATG4D-207ENST00000587256 FREM3P0C091 2139 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 CYSRT1A8MQ03 144 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 AHRRA9YTQ3 701 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 B4DXG7 233 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 ALG1L2C9J202 215 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 UBDO15205 165 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 SCN2BO60939 215 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 SOX30O94993 753 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 TBXA2RP21731 343 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 UQCRC2P22695 453 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 PHC1P78364 1004 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 SRYQ05066 204 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 RCAN2Q14206 197 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 GSTA3Q16772 222 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 APOOLQ6UXV4 268 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 ZNF527Q8NB42 609 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 GLB1L3Q8NCI6 653 aaPredicted RBP13.45□□□□□ -0.26
ATG4D-207ENST00000587256 OR4C3Q8NH37 302 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 WDYHV1Q96HA8 205 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 CCDC115Q96NT0 180 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 OR52E6Q96RD3 313 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 PANX1Q96RD7 426 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 TRIB1Q96RU8 372 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 SERHL2Q9H4I8 314 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 BTNL2Q9UIR0 455 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 KCNE3Q9Y6H6 103 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 MAST4O15021 2626 aa13.45□□□□□ -0.26
ATG4D-207ENST00000587256 CACNA1CQ13936 2221 aa13.44□□□□□ -0.26
ATG4D-207ENST00000587256 PHF3Q92576 2039 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms