RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 SLC15A1P46059 708 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 GIPRP48546 466 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 PCYT1AP49585 367 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 CSNK1EP49674 416 aaKnown RBP10.47□□□□□ -0.73
LIG3-204ENST00000585740 ARL4DP49703 201 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 GFERP55789 205 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 CDK5Q00535 292 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 ST3GAL4Q11206 333 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 FOXD4Q12950 439 aaPredicted RBP10.47□□□□□ -0.73
LIG3-204ENST00000585740 DCTN2Q13561 401 aaKnown RBP10.47□□□□□ -0.73
LIG3-204ENST00000585740 GINS1Q14691 196 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 EXOSC7Q15024 291 aaKnown RBP10.47□□□□□ -0.73
LIG3-204ENST00000585740 NCF4Q15080 339 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 MFSD4BQ5TF39 518 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 RNLSQ5VYX0 342 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 TMEM236Q5W0B7 351 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 SLC16A12Q6ZSM3 486 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 MBOAT2Q6ZWT7 520 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 GDF7Q7Z4P5 450 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 MRGPREQ86SM8 312 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 KMT5CQ86Y97 462 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 GRAMD2AQ8IUY3 354 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 CROCCP3Q8IVE0 287 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 CYP4Z2PQ8N1L4 340 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 FAM26EQ8N5C1 309 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 B3GNT7Q8NFL0 401 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 OIT3Q8WWZ8 545 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 OSTF1Q92882 214 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 ZG16BQ96DA0 208 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 MMABQ96EY8 250 aaPredicted RBP10.47□□□□□ -0.73
LIG3-204ENST00000585740 PEX11GQ96HA9 241 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 CNTNAP3BQ96NU0 1288 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 SLC38A2Q96QD8 506 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 ZNF559Q9BR84 538 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 CDCA4Q9BXL8 241 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 ALOXE3Q9BYJ1 711 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 CNTNAP3Q9BZ76 1288 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 PLGRKTQ9HBL7 147 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.47□□□□□ -0.73
LIG3-204ENST00000585740 SEMA4GQ9NTN9 838 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 HCN3Q9P1Z3 774 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 SEMA5BQ9P283 1151 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 LRIT1Q9P2V4 623 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 PRODH2Q9UF12 536 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 TMEM5Q9Y2B1 443 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 GPR55Q9Y2T6 319 aaPredicted RBP10.47□□□□□ -0.73
LIG3-204ENST00000585740 HEMK1Q9Y5R4 338 aaPredicted RBP10.47□□□□□ -0.73
LIG3-204ENST00000585740 RNF215Q9Y6U7 377 aa10.47□□□□□ -0.73
LIG3-204ENST00000585740 EP300Q09472 2414 aaPredicted RBP10.46□□□□□ -0.73
LIG3-204ENST00000585740 ZNF292O60281 2723 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 IGHV1OR21-1A0A087WYE8 117 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 IGHV5-51A0A0C4DH38 117 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 CDHR4A6H8M9 788 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 DYRK3O43781 588 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 TPST2O60704 377 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 ENTPD6O75354 484 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 SOX14O95416 240 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 STSP08842 583 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 CDK4P11802 303 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 GNSP15586 552 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 GLB1P16278 677 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 CD36P16671 472 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 S1PR1P21453 382 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 CALRP27797 417 aaKnown RBP10.46□□□□□ -0.73
LIG3-204ENST00000585740 OMPP47874 163 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 SERPINB10P48595 397 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 ZNF136P52737 540 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 NUDT6P53370 316 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 HSD11B2P80365 405 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 ANGPT1Q15389 498 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 CTF1Q16619 201 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 TIGD6Q17RP2 521 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 FLYWCH1Q4VC44 716 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 CCNJQ5T5M9 372 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 PLAG1Q6DJT9 500 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 SLC27A4Q6P1M0 643 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 PRICKLE2Q7Z3G6 844 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 PRSS42Q7Z5A4 293 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 HMGN2P46Q86SG4 172 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 NLGN4XQ8N0W4 816 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 OR7G1Q8NGA0 311 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 OR51Q1Q8NH59 317 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 PIK3R3Q92569 461 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 TMEM80Q96HE8 168 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 HS6ST2Q96MM7 605 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 OR1F2PQ96R84 312 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 RHNO1Q9BSD3 238 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 G6PC3Q9BUM1 346 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 TMEM27Q9HBJ8 222 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 Q9N2J8 555 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 CTPS2Q9NRF8 586 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 MED17Q9NVC6 651 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 GPR83Q9NYM4 423 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 TVP23BQ9NYZ1 205 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 GMEB2Q9UKD1 530 aa10.46□□□□□ -0.73
LIG3-204ENST00000585740 NUP210LQ5VU65 1888 aa10.46□□□□□ -0.74
LIG3-204ENST00000585740 ZFHX4Q86UP3 3567 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 PCDH15Q96QU1 1955 aa10.45□□□□□ -0.74
LIG3-204ENST00000585740 MN1Q10571 1320 aaPredicted RBP10.45□□□□□ -0.74
LIG3-204ENST00000585740 GXYLT2A0PJZ3 443 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms