RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460		H7C1Q1	480 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	GMFG	O60234	142 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	ANGPTL1	O95841	491 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	THBD	P07204	575 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	NTS	P30990	170 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	MAP3K8	P41279	467 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	RPS3A	P61247	264 aa	Known RBP	14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	FGFBP1	Q14512	234 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	SLC29A2	Q14542	456 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	ZNHIT3	Q15649	155 aa	Predicted RBP	14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	SGCB	Q16585	318 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	IMPG1	Q17R60	797 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	GRAMD1B	Q3KR37	738 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	ZYG11A	Q6WRX3	759 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	SH2D5	Q6ZV89	423 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	FAM214B	Q7L5A3	538 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	GGN	Q86UU5	652 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	EXOC3L1	Q86VI1	746 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	OR4C3	Q8NH37	302 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PPP1R14C	Q8TAE6	165 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PIK3R3	Q92569	461 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	HOXB13	Q92826	284 aa	Predicted RBP	14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	COX4I2	Q96KJ9	171 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460		Q96MF0	132 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	TBL1XR1	Q9BZK7	514 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	KLHL4	Q9C0H6	718 aa		14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	FN1	P02751	2386 aa	Known RBP	14.69	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	TTC36	A6NLP5	189 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	FAM171A2	A8MVW0	826 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	KLF4	O43474	513 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	FAM153B	P0C7A2	387 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PRPS2	P11908	318 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PSMD4	P55036	377 aa	Known RBP	14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	EXOC3L2	Q2M3D2	409 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	FAM153C	Q494X1	144 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	YTHDF3	Q7Z739	585 aa	Known RBP	14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	CCDC126	Q96EE4	140 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	CCL19	Q99731	98 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	NPAS1	Q99742	590 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	BDH2	Q9BUT1	245 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	TXLNGY	Q9BZA5	131 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	C3orf14	Q9HBI5	128 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	RRAGD	Q9NQL2	400 aa	Predicted RBP	14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	TBK1	Q9UHD2	729 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	NSD1	Q96L73	2696 aa	Predicted RBP	14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	DNHD1	Q96M86	4753 aa		14.68	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	JMJD1C	Q15652	2540 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	SEC22B	O75396	215 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	RSL1D1	O76021	490 aa	Known RBP	14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	NKX2-2	O95096	273 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	KCNH1	O95259	989 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	OPN1LW	P04000	364 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	IFI6	P09912	130 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	MYL2	P10916	166 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	IL11	P20809	199 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	EIF1AX	P47813	144 aa	Known RBP	14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	ANKRD26P1	Q6NSI1	321 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	C20orf204	Q6ZNR8	217 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	FRMD7	Q6ZUT3	714 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	IKBIP	Q70UQ0	350 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	FAM110B	Q8TC76	370 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	GPR151	Q8TDV0	419 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	IGFBPL1	Q8WX77	278 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	GFM2	Q969S9	779 aa	Known RBP	14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PERP	Q96FX8	193 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	EQTN	Q9NQ60	294 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	CLEC4A	Q9UMR7	237 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	VDAC3	Q9Y277	283 aa		14.67	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	ARID1A	O14497	2285 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	TRIM64	A6NGJ6	449 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	TRIM64B	A6NI03	449 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	ALG1L2	C9J202	215 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	NPIPB8	E9PQR5	432 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460		H3BQF6	201 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	EIF1AY	O14602	144 aa	Known RBP	14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	SMAD7	O15105	426 aa	Known RBP	14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PROC	P04070	461 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PSMA4	P25789	261 aa	Known RBP	14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PRKAG1	P54619	331 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	DNAJB13	P59910	316 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	HSPB3	Q12988	150 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	CPTP	Q5TA50	214 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	STAC2	Q6ZMT1	411 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	ZAR1	Q86SH2	424 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	GALNT10	Q86SR1	603 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	IFT20	Q8IY31	132 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	OR10D3	Q8NH80	312 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	CAVIN3	Q969G5	261 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	CIDEC	Q96AQ7	238 aa	Predicted RBP	14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	METTL2A	Q96IZ6	378 aa	Known RBP	14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	ADGRG7	Q96K78	797 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	KLHDC3	Q9BQ90	382 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PRRG4	Q9BZD6	226 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	NTM	Q9P121	344 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	STOML1	Q9UBI4	398 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	PTGDR2	Q9Y5Y4	395 aa		14.66	□□□□□ -0.06
PRKAR1A-206	ENST00000585460	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		14.65	□□□□□ -0.06
PRKAR1A-206	ENST00000585460		A0A087WZY1	265 aa		14.65	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms