RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 SNRNP40Q96DI7 357 aaKnown RBP12.19□□□□□ -0.46
CHAF1A-202ENST00000585371 GPATCH1Q9BRR8 931 aaKnown RBP12.19□□□□□ -0.46
CHAF1A-202ENST00000585371 SLC38A1Q9H2H9 487 aa12.19□□□□□ -0.46
CHAF1A-202ENST00000585371 RUBCNLQ9H714 662 aa12.19□□□□□ -0.46
CHAF1A-202ENST00000585371 NANOGQ9H9S0 305 aa12.19□□□□□ -0.46
CHAF1A-202ENST00000585371 TUBA8Q9NY65 449 aaPredicted RBP12.19□□□□□ -0.46
CHAF1A-202ENST00000585371 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.19□□□□□ -0.46
CHAF1A-202ENST00000585371 MRTO4Q9UKD2 239 aaKnown RBP12.19□□□□□ -0.46
CHAF1A-202ENST00000585371 PCDHGB3Q9Y5G1 929 aa12.19□□□□□ -0.46
CHAF1A-202ENST00000585371 RELNP78509 3460 aa12.19□□□□□ -0.46
CHAF1A-202ENST00000585371 NPIPA5A0A0B4J1W7 369 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 CENPVL1A0A0U1RR11 272 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 PRAMEF25A6NGN4 478 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 NPIPA7E9PJI5 369 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 GLSO94925 669 aaPredicted RBP12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 OXSR1O95747 527 aaPredicted RBP12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 AGR2O95994 175 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 AK1P00568 194 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 NPPAP01160 153 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 NGFRP08138 427 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 CHRM4P08173 479 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 NPIPA8P0DM63 369 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 GNLYP22749 145 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 PPIBP23284 216 aaKnown RBP12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 EVI2BP34910 448 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 KRT20P35900 424 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 CRATP43155 626 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 UQCRFS1P47985 274 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 RFX3P48380 749 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 PSMD4P55036 377 aaKnown RBP12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 MTPNP58546 118 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 DSTNP60981 165 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 SNTA1Q13424 505 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 ADRM1Q16186 407 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 HYAL4Q2M3T9 481 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 MMEL1Q495T6 779 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 RABL3Q5HYI8 236 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 TBCELQ5QJ74 424 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 TYW3Q6IPR3 259 aaKnown RBP12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 LURAP1LQ8IV03 231 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 CISD2Q8N5K1 135 aaKnown RBP12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 ZG16BQ96DA0 208 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 TMCO6Q96DC7 493 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 FAM173AQ9BQD7 235 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 G6PC3Q9BUM1 346 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 OSBPL11Q9BXB4 747 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 KAT8Q9H7Z6 458 aaKnown RBP12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 GALNT9Q9HCQ5 603 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 EXD2Q9NVH0 621 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 ZNF407Q9C0G0 2248 aa12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 USP9XQ93008 2570 aaPredicted RBP12.18□□□□□ -0.46
CHAF1A-202ENST00000585371 DSPPQ9NZW4 1301 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 C2orf72A6NCS6 295 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 ALG1L2C9J202 215 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 KLRC4-KLRK1H3BQV0 150 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 AIM2O14862 343 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 SNPHO15079 494 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 KIAA0513O60268 411 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 RASAL1O95294 804 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 RFPL3SP0C7P2 107 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 T-ENOLP0DO92 83 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 ARAFP10398 606 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 TBXA2RP21731 343 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 SLC6A2P23975 617 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 MST1P26927 711 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 CPA2P48052 419 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 RPP38P78345 283 aaKnown RBP12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 CHRNEQ04844 493 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 KRT72Q14CN4 511 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 ZNF141Q15928 474 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 MAPK14Q16539 360 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 KLHL26Q53HC5 615 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 SLC30A6Q6NXT4 461 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 HACD2Q6Y1H2 254 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 LRRC74BQ6ZQY2 392 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 NET1Q7Z628 596 aaPredicted RBP12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 CALHM3Q86XJ0 350 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 PTOV1Q86YD1 416 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 SIAH3Q8IW03 269 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 WDSUB1Q8N9V3 476 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 FBXO27Q8NI29 283 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 SSC4DQ8WTU2 575 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 SLC38A5Q8WUX1 472 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 CMTM5Q96DZ9 223 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 TMEM41AQ96HV5 264 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 TRNT1Q96Q11 434 aaKnown RBP12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 RSPO3Q9BXY4 272 aaPredicted RBP12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 RAD21L1Q9H4I0 556 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 METTL7AQ9H8H3 244 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 A4GALTQ9NPC4 353 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 POLE3Q9NRF9 147 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 PLEKHB1Q9UF11 243 aaPredicted RBP12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 ABCG2Q9UNQ0 655 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 LIPT1Q9Y234 373 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 ESPL1Q14674 2120 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 DNAJC13O75165 2243 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 SVILO95425 2214 aa12.17□□□□□ -0.46
CHAF1A-202ENST00000585371 SPTBN1Q01082 2364 aaKnown RBP12.16□□□□□ -0.46
CHAF1A-202ENST00000585371 GTF3C1Q12789 2109 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms