RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 FBXO30Q8TB52 745 aa11.23□□□□□ -0.61
SS18-225ENST00000585121 PGM2Q96G03 612 aa11.23□□□□□ -0.61
SS18-225ENST00000585121 ZFP3Q96NJ6 502 aa11.23□□□□□ -0.61
SS18-225ENST00000585121 TUBA1CQ9BQE3 449 aa11.23□□□□□ -0.61
SS18-225ENST00000585121 PIGQQ9BRB3 760 aa11.23□□□□□ -0.61
SS18-225ENST00000585121 G6PC3Q9BUM1 346 aa11.23□□□□□ -0.61
SS18-225ENST00000585121 BHLHE41Q9C0J9 482 aaPredicted RBP11.23□□□□□ -0.61
SS18-225ENST00000585121 NEUROD4Q9HD90 331 aa11.23□□□□□ -0.61
SS18-225ENST00000585121 NOP53Q9NZM5 478 aaKnown RBP11.23□□□□□ -0.61
SS18-225ENST00000585121 STOML1Q9UBI4 398 aa11.23□□□□□ -0.61
SS18-225ENST00000585121 FREM3P0C091 2139 aa11.23□□□□□ -0.61
SS18-225ENST00000585121 NCKAP5O14513 1909 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 EXPH5Q8NEV8 1989 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 DCHS2Q6V1P9 2916 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 SYT5O00445 386 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 CFLARO15519 480 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 ITM2AO43736 263 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 KCNK2O95069 426 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 ANGPTL1O95841 491 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 IL18BPO95998 194 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 TMIGD3P0DMS9 266 aaPredicted RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 ACP2P11117 423 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 POU3F2P20265 443 aaPredicted RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 MAP3K8P41279 467 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 CCT3P49368 545 aaKnown RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 STARP49675 285 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 LHX2P50458 406 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 RPL14P50914 215 aaKnown RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 EEF1A1P68104 462 aaKnown RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 POU6F2P78424 691 aaPredicted RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 GRAMD1BQ3KR37 738 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 GLYR1Q49A26 553 aaPredicted RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 EEF1A1P5Q5VTE0 462 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 BHLHB9Q6PI77 547 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 P4HA3Q7Z4N8 544 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 KRTCAP2Q8N6L1 136 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 ZNF781Q8N8C0 355 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 SLC16A11Q8NCK7 471 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 NAXEQ8NCW5 288 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 HOXB13Q92826 284 aaPredicted RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 RNASE6Q93091 150 aaKnown RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 WNT2BQ93097 391 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 MOAP1Q96BY2 351 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 COQ8BQ96D53 544 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 FAM120BQ96EK7 910 aaKnown RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 GIMAP5Q96F15 307 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 YIPF4Q9BSR8 244 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 DUSP26Q9BV47 211 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 FLRT3Q9NZU0 649 aa11.22□□□□□ -0.61
SS18-225ENST00000585121 FAF1Q9UNN5 650 aaPredicted RBP11.22□□□□□ -0.61
SS18-225ENST00000585121 TACC2O95359 2948 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 CLCA1A8K7I4 914 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 KDM4EB2RXH2 506 aaPredicted RBP11.21□□□□□ -0.61
SS18-225ENST00000585121 EEF1E1-BLOC1S5C9J1V9 151 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 SCDO00767 359 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 EEF1E1O43324 174 aaKnown RBP11.21□□□□□ -0.61
SS18-225ENST00000585121 NDUFB5O43674 189 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 IGKV1D-16P01601 117 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 HMGN2P05204 90 aaKnown RBP11.21□□□□□ -0.61
SS18-225ENST00000585121 NGFRP08138 427 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 DHRS4L1P0CG22 281 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 G6PDP11413 515 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 ZNF708P17019 499 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 ATP6V1C1P21283 382 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 TBXA2RP21731 343 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 BGNP21810 368 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 KIR2DL3P43628 341 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 ZNF136P52737 540 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 DIO3P55073 304 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 TP53BP2Q13625 1128 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 LASP1Q14847 261 aaKnown RBP11.21□□□□□ -0.61
SS18-225ENST00000585121 DUSP5Q16690 384 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.21□□□□□ -0.61
SS18-225ENST00000585121 PGS1Q32NB8 556 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 FIGNL1Q6PIW4 674 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 KIF18BQ86Y91 864 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 GRAMD2AQ8IUY3 354 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 MISPQ8IVT2 679 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 UBQLNLQ8IYU4 475 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 GOLGA6L1Q8N7Z2 621 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 ANKRD42Q8N9B4 389 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 C9orf106Q8NAJ2 232 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 RELL2Q8NC24 303 aaPredicted RBP11.21□□□□□ -0.61
SS18-225ENST00000585121 SFXN5Q8TD22 340 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 ADAMTS15Q8TE58 950 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 C1GALT1C1Q96EU7 318 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 C16orf58Q96GQ5 468 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 PPP1R36Q96LQ0 422 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 UCN2Q96RP3 112 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 STACQ99469 402 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 SH3GL2Q99962 352 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 BTBD2Q9BX70 525 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 ACTRT3Q9BYD9 372 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 UBQLN4Q9NRR5 601 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 DUSP22Q9NRW4 184 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 GIN1Q9NXP7 522 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 ASIC5Q9NY37 505 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 PCDHGB4Q9UN71 923 aa11.21□□□□□ -0.61
SS18-225ENST00000585121 IGLV3-32A0A0A0MS00 114 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms