RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 UTRNP46939 3433 aa3.55□□□□□ -1.84
SMCHD1-208ENST00000583344 FER1L6Q2WGJ9 1857 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 COL1A2P08123 1366 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CCDC162PA2VCL2 907 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 KRT87PA6NCN2 255 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 PRORSD1PA6NEY8 169 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 OR6C76A6NM76 312 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 BBIP1A8MTZ0 92 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 E9PQ18 207 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 PIRO00625 290 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 XPO1O14980 1071 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 UBDO15205 165 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 ACOX3O15254 700 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CFLARO15519 480 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 B4GALT5O43286 388 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 GPC4O75487 556 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 DAB1O75553 588 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 JRKO75564 520 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 SERPINB7O75635 380 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 SULT1C4O75897 302 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 ZFAND5O76080 213 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 VAPBO95292 243 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC25A27O95847 323 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 PNPP00491 289 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 GPIP06744 558 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 HMBSP08397 361 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 RBP1P09455 135 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 ARF4P18085 180 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 IMPDH1P20839 514 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 IL10P22301 178 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 GPX3P22352 226 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CCNCP24863 283 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 FASP25445 335 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 MTHFRP42898 656 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 PSMD7P51665 324 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CCR3P51677 355 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 KPNA2P52292 529 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 TMBIM6P55061 237 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 TPD52P55327 224 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 HSD17B7P56937 341 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 RAB10P61026 200 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 OSTNP61366 133 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 ATP6V0D1P61421 351 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 NAA20P61599 178 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 ADARB1P78563 741 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 SP4Q02446 784 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CDH17Q12864 832 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 BNIP2Q12982 314 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CBX3Q13185 183 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 TMED1Q13445 227 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 ENPP2Q13822 863 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 PRPSAP1Q14558 356 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 DLG2Q15700 870 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 ATP6AP1Q15904 470 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 TYSND1Q2T9J0 566 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 UGT3A2Q3SY77 523 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 XKR4Q5GH76 650 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 GLRA4Q5JXX5 417 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 PPM1LQ5SGD2 360 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 PM20D1Q6GTS8 502 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 LCN8Q6JVE9 175 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 NANOGP8Q6NSW7 305 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 NIPAL1Q6NVV3 410 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CES3Q6UWW8 571 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 RBPMS2Q6ZRY4 209 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 MSANTD1Q6ZTZ1 278 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 FRA10AC1Q70Z53 315 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 GPR141Q7Z602 305 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CAMKMTQ7Z624 323 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 ACOT1Q86TX2 421 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 ISCA2Q86U28 154 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 KCNMB4Q86W47 210 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 DHFR2Q86XF0 187 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC22A9Q8IVM8 553 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 FUNDC1Q8IVP5 155 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CENPLQ8N0S6 344 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CLYBLQ8N0X4 340 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 DEFB106AQ8N104 65 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 PYROXD2Q8N2H3 581 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 C1orf52Q8N6N3 182 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 BMPERQ8N8U9 685 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CAMKVQ8NCB2 501 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 OR2T34Q8NGX1 318 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 OR2T3Q8NH03 318 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 FIBINQ8TAL6 211 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 GIPC3Q8TF64 312 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 RNF139Q8WU17 664 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CHPT1Q8WUD6 406 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CANT1Q8WVQ1 401 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC35B4Q969S0 331 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 C12orf43Q96C57 262 aaKnown RBP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 NXNL1Q96CM4 212 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 ISOC1Q96CN7 298 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 L3HYPDHQ96EM0 354 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 CENPNQ96H22 339 aaPredicted RBP3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 PLEKHA8Q96JA3 519 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 BTN2A3PQ96KV6 586 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 TSNARE1Q96NA8 513 aa3.54□□□□□ -1.84
SMCHD1-208ENST00000583344 OR2A14Q96R47 310 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms