RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 RNF165Q6ZSG1 346 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 C22orf34Q6ZV56 151 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 PLEKHM3Q6ZWE6 761 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 LARP4Q71RC2 724 aaKnown RBP eCLIP12.22□□□□□ -0.45
SS18-222ENST00000582792 RPS27LQ71UM5 84 aaKnown RBP12.22□□□□□ -0.45
SS18-222ENST00000582792 UBQLNLQ8IYU4 475 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 KIRREL3Q8IZU9 778 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 MEIOBQ8N635 442 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 OR4K17Q8NGC6 315 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 RAB3IL1Q8TBN0 382 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 ZNF675Q8TD23 568 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 ERP27Q96DN0 273 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 ZC3HAV1LQ96H79 300 aaKnown RBP12.22□□□□□ -0.45
SS18-222ENST00000582792 MECRQ9BV79 373 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 FAIM2Q9BWQ8 316 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 ELOVL6Q9H5J4 265 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 ANKRA2Q9H9E1 313 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 RNF122Q9H9V4 155 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 BRF2Q9HAW0 419 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 EML4Q9HC35 981 aaKnown RBP12.22□□□□□ -0.45
SS18-222ENST00000582792 FARSBQ9NSD9 589 aaKnown RBP12.22□□□□□ -0.45
SS18-222ENST00000582792 ROS1P08922 2347 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 C17orf51A8MQB3 221 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 TMEM114B3SHH9 223 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 CRLF1O75462 422 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 TNFRSF21O75509 655 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 OR4F21O95013 312 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 SERPINE1P05121 402 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 FGF4P08620 206 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 ALDH9A1P49189 494 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 PNLIPRP2P54317 469 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 WDR4P57081 412 aaKnown RBP12.21□□□□□ -0.45
SS18-222ENST00000582792 GUSBP1Q15486 140 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 SGO1Q5FBB7 561 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 NPSR1Q6W5P4 371 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 FADS6Q8N9I5 356 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 ZNF610Q8N9Z0 462 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 METTL6Q8TCB7 284 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 VSTM2LQ96N03 204 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 PINK1Q9BXM7 581 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 MID1IP1Q9NPA3 183 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 ZNF701Q9NV72 531 aaPredicted RBP12.21□□□□□ -0.45
SS18-222ENST00000582792 UTS2RQ9UKP6 389 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 ZNF175Q9Y473 711 aa12.21□□□□□ -0.45
SS18-222ENST00000582792 ANK3Q12955 4377 aaKnown RBP12.21□□□□□ -0.46
SS18-222ENST00000582792 H0YC42 278 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 MANBAO00462 879 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 UBFD1O14562 309 aaKnown RBP12.2□□□□□ -0.46
SS18-222ENST00000582792 DYNC1I1O14576 645 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 TMCC2O75069 709 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 NME6O75414 186 aaPredicted RBP12.2□□□□□ -0.46
SS18-222ENST00000582792 PDYNP01213 254 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 UROSP10746 265 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 TSPAN8P19075 237 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 HK1P19367 917 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 TBXA2RP21731 343 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 HMOX2P30519 316 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 SUCLG1P53597 346 aaKnown RBP12.2□□□□□ -0.46
SS18-222ENST00000582792 TPD52P55327 224 aaPredicted RBP12.2□□□□□ -0.46
SS18-222ENST00000582792 MRPS22P82650 360 aaKnown RBP12.2□□□□□ -0.46
SS18-222ENST00000582792 CSTF3Q12996 717 aaKnown RBP12.2□□□□□ -0.46
SS18-222ENST00000582792 CAPRIN1Q14444 709 aaKnown RBP12.2□□□□□ -0.46
SS18-222ENST00000582792 BEX5Q5H9J7 111 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 RAET1LQ5VY80 246 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 ANKRD34AQ69YU3 496 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 CDYL2Q8N8U2 506 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 ANKRD42Q8N9B4 389 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 FNDC9Q8TBE3 224 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 TMEM171Q8WVE6 324 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 DSN1Q9H410 356 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 FOLH1BQ9HBA9 442 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 PFDN4Q9NQP4 134 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 NMRK1Q9NWW6 199 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 PPP4R1LQ9P1A2 415 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 PROCRQ9UNN8 238 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.2□□□□□ -0.46
SS18-222ENST00000582792 ZNF337Q9Y3M9 751 aa12.2□□□□□ -0.46
SS18-222ENST00000582792 SONP18583 2426 aaKnown RBP12.2□□□□□ -0.46
SS18-222ENST00000582792 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.19□□□□□ -0.46
SS18-222ENST00000582792 OR2M5A3KFT3 312 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 LINC01387J3KSC0 135 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 AZIN1O14977 448 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 SEC14L5O43304 696 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 KLF4O43474 513 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 ULK1O75385 1050 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 THBDP07204 575 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 EVI2BP34910 448 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 OCRLQ01968 901 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 KRTAP1-1Q07627 177 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 GANABQ14697 944 aaKnown RBP12.19□□□□□ -0.46
SS18-222ENST00000582792 PON3Q15166 354 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 CHI3L2Q15782 390 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 ARL13AQ5H913 290 aaPredicted RBP12.19□□□□□ -0.46
SS18-222ENST00000582792 FAM214BQ7L5A3 538 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 SLC44A2Q8IWA5 706 aaPredicted RBP12.19□□□□□ -0.46
SS18-222ENST00000582792 CCDC116Q8IYX3 515 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 C1orf52Q8N6N3 182 aaKnown RBP12.19□□□□□ -0.46
SS18-222ENST00000582792 OR2M3Q8NG83 312 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 OR9A2Q8NGT5 310 aa12.19□□□□□ -0.46
SS18-222ENST00000582792 SELENOMQ8WWX9 145 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms